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Gene name

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In atlas

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Detectable

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ATP6V1F
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    TISSUE

  • CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

ATP6V1F

Gene description

ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F

Protein class

Predicted intracellular proteins
Transporters

Predicted localization

Intracellular

Number of transcripts

2
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Expressed in all
GTEx:Expressed in all
FANTOM5:Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Cytoplasmic and membranous expression in several tissues.

DATA RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data.

Reliability score

Supported based on 3 antibodies.
HPA048700 , HPA062011 , CAB009529
SHOW MORE

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Lymph node

Liver

Pancreas

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all

GENE INFORMATION

Gene name

ATP6V1F (HGNC Symbol)

Synonyms

ATP6S14, VATF, Vma7

Description

ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F (HGNC Symbol)

Entrez gene summary

This gene encodes a component of vacuolar ATPase (V-ATPase), a multisubunit enzyme that mediates acidification of eukaryotic intracellular organelles. V-ATPase dependent organelle acidification is necessary for such intracellular processes as protein sorting, zymogen activation, receptor-mediated endocytosis, and synaptic vesicle proton gradient generation. V-ATPase is composed of a cytosolic V1 domain and a transmembrane V0 domain. The V1 domain consists of three A and three B subunits, two G subunits plus the C, D, E, F, and H subunits. The V1 domain contains the ATP catalytic site. The V0 domain consists of five different subunits: a, c, c', c"", and d. Additional isoforms of many of the V1 and V0 subunit proteins are encoded by multiple genes or alternatively spliced transcript variants. This encoded protein is the V1 domain F subunit protein. [provided by RefSeq, Jul 2008]

Chromosome

7

Cytoband

q32.1

Chromosome location (bp)

128862826 - 128865844

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000128524 (version 83.38)

Entrez gene

9296

UniProt

Q16864 (UniProt - Evidence at protein level)

neXtProt

NX_Q16864

Antibodypedia

ATP6V1F antibodies

PROTEIN BROWSER

ATP6V1F-001
ATP6V1F-002

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

ATP6V1F-001
ENSP00000249289
ENST00000249289
Q16864 [Direct mapping]
V-type proton ATPase subunit F
A4D1K0 [Target identity:100%; Query identity:100%]
V-type proton ATPase subunit F
Show all
Transporters
   Primary Active Transporters
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005829 [cytosol]
GO:0006879 [cellular iron ion homeostasis]
GO:0008286 [insulin receptor signaling pathway]
GO:0015078 [hydrogen ion transmembrane transporter activity]
GO:0015991 [ATP hydrolysis coupled proton transport]
GO:0015992 [proton transport]
GO:0016020 [membrane]
GO:0016469 [proton-transporting two-sector ATPase complex]
GO:0016471 [vacuolar proton-transporting V-type ATPase complex]
GO:0033180 [proton-transporting V-type ATPase, V1 domain]
GO:0033572 [transferrin transport]
GO:0034220 [ion transmembrane transport]
GO:0042624 [ATPase activity, uncoupled]
GO:0042625 [ATPase activity, coupled to transmembrane movement of ions]
GO:0046961 [proton-transporting ATPase activity, rotational mechanism]
GO:0055085 [transmembrane transport]
GO:0070062 [extracellular exosome]
GO:0090382 [phagosome maturation]
Show all
119 aa
13.4 kDa
No 0
ATP6V1F-002
ENSP00000417378
ENST00000492758
Q16864 [Direct mapping]
V-type proton ATPase subunit F
Show all
Transporters
   Primary Active Transporters
   SCAMPI predicted membrane proteins
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005829 [cytosol]
GO:0006879 [cellular iron ion homeostasis]
GO:0008286 [insulin receptor signaling pathway]
GO:0015078 [hydrogen ion transmembrane transporter activity]
GO:0015991 [ATP hydrolysis coupled proton transport]
GO:0015992 [proton transport]
GO:0016020 [membrane]
GO:0016469 [proton-transporting two-sector ATPase complex]
GO:0016471 [vacuolar proton-transporting V-type ATPase complex]
GO:0033180 [proton-transporting V-type ATPase, V1 domain]
GO:0033572 [transferrin transport]
GO:0034220 [ion transmembrane transport]
GO:0042624 [ATPase activity, uncoupled]
GO:0042625 [ATPase activity, coupled to transmembrane movement of ions]
GO:0046961 [proton-transporting ATPase activity, rotational mechanism]
GO:0055085 [transmembrane transport]
GO:0070062 [extracellular exosome]
GO:0090382 [phagosome maturation]
Show all
147 aa
16.4 kDa
No 0

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