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CDHR3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:2.7TPM
GTEx:2.4RPKM
FANTOM5:16.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA011218

  

Endothelial cells

 Not detected  

Glandular cells

 Not detected  

Peripheral nerve/ganglion

 Not detected  
 
 
 

COLON - HPA RNA-seq

Average TPM

2.7
overview Male, age 54 Sample 1
TPM: 0.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 0.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 9.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 13
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 1.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 1.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 2.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

2.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 3.2
Samples: 149

Max RPKM: 31.4
Min RPKM: 0.2
Std RPKM: 4.6
Median RPKM: 1.5
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 31.4
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 26.2
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 22.6
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 19.4
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 16.9
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 15.8
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 15.3
GTEX-12WSD-2626-SM-5EGJE 60-69 years, female 12.5
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 9.5
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 8.9
Show all
Colon - Transverse
RPKM: 1.8
Samples: 196

Max RPKM: 23.7
Min RPKM: 0.2
Std RPKM: 2.6
Median RPKM: 1.0
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 23.7
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 13.3
GTEX-XGQ4-1226-SM-4AT67 50-59 years, male 13.0
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 10.6
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 10.4
GTEX-11GSP-1626-SM-5986N 60-69 years, female 10.1
GTEX-XQ8I-2126-SM-4BOOM 50-59 years, male 9.4
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 7.9
GTEX-11ZVC-2126-SM-5EGJ1 50-59 years, female 7.5
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 7.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

16.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 16.2
FF:10014-101C5 62,83,84 years, mixed 16.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.