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ESOPHAGUS - Expression summary

RNA expression
HPA:7.3TPM
GTEx:2.5RPKM
FANTOM5:20.8Tags Per Million

ESOPHAGUS - Annotated protein expression

Pending normal tissue analysis

ESOPHAGUS - HPA RNA-seq

Average TPM

7.3
overview Female, age 70 Sample 1
TPM: 5.3
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 9.3
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 7.5
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

2.5

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 2.5
Samples: 286

Max RPKM: 5.3
Min RPKM: 1.1
Std RPKM: 0.7
Median RPKM: 2.4
GTEX-NPJ8-1926-SM-3MJGB 40-49 years, male 5.3
GTEX-146FQ-1026-SM-5LU8I 30-39 years, male 4.7
GTEX-XMD2-1326-SM-4YCET 60-69 years, female 4.5
GTEX-11DZ1-2026-SM-5A5KG 50-59 years, male 4.4
GTEX-RU72-0726-SM-46MUW 50-59 years, female 4.4
GTEX-ZZPT-1426-SM-5N9C5 50-59 years, male 4.4
GTEX-144GO-2726-SM-5O9A2 60-69 years, male 4.3
GTEX-R45C-1226-SM-48FEE 60-69 years, female 4.3
GTEX-11DYG-1326-SM-5N9DO 60-69 years, male 4.2
GTEX-P78B-1026-SM-3NMC4 40-49 years, female 4.2
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

20.8

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 20.8
FF:10015-101C6 68,74,75 years, mixed 20.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.