Tissue expression of NGDN - Staining in small intestine

SMALL INTESTINE - Expression summary

Protein expression

RNA expression

HPA:	23.8	TPM
GTEx:	9.1	RPKM
FANTOM5:	10.0	Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:

Not detected

Antibody staining	Antibody HPA000944
Glandular cells	Not detected

SMALL INTESTINE - HPA RNA-seq

Average TPM	23.8

Male, age 65

Sample 1
TPM: 20.7

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 39

Sample 2
TPM: 27.7

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 68

Sample 3
TPM: 22.6

Cell types%

Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55

Male, age 85

Sample 4
TPM: 24.3

SMALL INTESTINE - GTEx RNA-seq

Average RPKM	9.1

GTEx sample id

Sample description

RPKM

Small Intestine - Terminal Ileum
RPKM: 9.1

Samples: 88

Max RPKM: 16.0
Min RPKM: 5.8
Std RPKM: 1.9
Median RPKM: 8.9

GTEX-148VJ-2226-SM-5NQ9M

70-79 years, male

16.0

GTEX-WRHK-1026-SM-4MVOD

20-29 years, female

14.1

GTEX-VUSG-1726-SM-4KKZL

50-59 years, male

13.6

GTEX-UPK5-2026-SM-4JBIM

40-49 years, male

13.1

GTEX-131XG-1726-SM-5LZUR

50-59 years, female

12.7

GTEX-1399U-2126-SM-5IFEZ

50-59 years, female

12.6

GTEX-13O61-1326-SM-5KM31

60-69 years, male

12.4

GTEX-11VI4-1626-SM-5EQKO

40-49 years, female

12.2

GTEX-11NSD-1726-SM-5N9C3

20-29 years, male

11.6

GTEX-ZEX8-1826-SM-57WBH

50-59 years, male

11.5

Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million	10.0

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 10.0

FF:10024-101D6

15,40,85 years, mixed

10.0