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COLON - Expression summary

RNA expression
HPA:0.4TPM
GTEx:0.0RPKM
FANTOM5:0.0Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

0.4
overview Male, age 54 Sample 1
TPM: 0.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 0.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 0.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 0
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 0.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.0
Samples: 149

Max RPKM: 0.3
Min RPKM: 0.0
Std RPKM: 0.0
Median RPKM: 0.0
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 0.3
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 0.3
GTEX-ZV6S-1126-SM-57WE9 40-49 years, female 0.3
GTEX-13CF3-1326-SM-5LZXZ 60-69 years, female 0.2
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 0.2
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 0.2
GTEX-ZQG8-2426-SM-57WEE 60-69 years, female 0.2
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 0.2
GTEX-111CU-1226-SM-5EGIN 50-59 years, male 0.1
GTEX-117YX-0526-SM-5EGJH 50-59 years, male 0.1
Show all
Colon - Transverse
RPKM: 0.0
Samples: 196

Max RPKM: 0.6
Min RPKM: 0.0
Std RPKM: 0.0
Median RPKM: 0.0
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 0.6
GTEX-12C56-0626-SM-5EGGC 20-29 years, male 0.4
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 0.4
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 0.3
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 0.3
GTEX-XQ8I-2126-SM-4BOOM 50-59 years, male 0.3
GTEX-11P7K-1526-SM-5EGI7 30-39 years, male 0.2
GTEX-1211K-1726-SM-5FQUJ 60-69 years, female 0.2
GTEX-13FTW-1826-SM-5IJEN 40-49 years, male 0.2
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 0.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

0.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 0.0
FF:10014-101C5 62,83,84 years, mixed 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.