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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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HIP1R
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PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

HIP1R

Gene description

Huntingtin interacting protein 1 related

Protein class

Cancer-related genes
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

2
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Mixed
HPA (normal tissue):Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

General cytoplasmic expression combined with membranous expression in several tissues.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data.

Reliability score

Approved based on 3 antibodies.
HPA038135 , HPA038136 , CAB017187
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PROGNOSTIC SUMMARY

Prognostic marker in renal cancer (favourable) and urothelial cancer (favourable).
Renal cancer p<0.001
Urothelial cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA038135
HPA038136
CAB017187

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Most cancer cells showed moderate to strong cytoplasmic staining that was combined with membranous and/or nuclear positivity in several cases. Hepatocellular carcinomas, most squamous cell carcinomas, melanomas, renal and female genital cancers were weakly stained or negative.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Most cancer cells displayed moderate to strong cytoplasmic and membranous staining. A majority of melanomas and renal cancers were weakly stained.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Most cancers showed moderate cytoplasmic positivity. A few cases of gliomas, lymphomas, melanomas, testicular and thyroid cancers showed strong cytoplasmic immunoreactivity.

GENE INFORMATION

Gene name

HIP1R (HGNC Symbol)

Synonyms

FLJ14000, HIP12, HIP3, ILWEQ, KIAA0655

Description

Huntingtin interacting protein 1 related (HGNC Symbol)

Entrez gene summary

Chromosome

12

Cytoband

q24.31

Chromosome location (bp)

122834453 - 122862960

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000130787 (version 83.38)

Entrez gene

9026

UniProt

O75146 (UniProt - Evidence at protein level)

neXtProt

NX_O75146

Antibodypedia

HIP1R antibodies

PROTEIN BROWSER

HIP1R-001
HIP1R-010

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

HIP1R-001
ENSP00000253083
ENST00000253083
O75146 [Direct mapping]
Huntingtin-interacting protein 1-related protein
Show all
Predicted intracellular proteins
Cancer-related genes
   Candidate cancer biomarkers
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005515 [protein binding]
GO:0005543 [phospholipid binding]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005905 [coated pit]
GO:0006898 [receptor-mediated endocytosis]
GO:0006915 [apoptotic process]
GO:0016020 [membrane]
GO:0030136 [clathrin-coated vesicle]
GO:0030276 [clathrin binding]
GO:0030665 [clathrin-coated vesicle membrane]
GO:0035091 [phosphatidylinositol binding]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0048471 [perinuclear region of cytoplasm]
GO:0072583 [clathrin-mediated endocytosis]
Show all
1068 aa
119.4 kDa
No 0
HIP1R-010
ENSP00000446236
ENST00000535012
H0YH66 [Direct mapping]
Huntingtin-interacting protein 1-related protein
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005905 [coated pit]
GO:0006915 [apoptotic process]
GO:0030136 [clathrin-coated vesicle]
GO:0030276 [clathrin binding]
GO:0035091 [phosphatidylinositol binding]
GO:0072583 [clathrin-mediated endocytosis]
Show all
197 aa
21.7 kDa
No 0

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