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MPP1

COLON - Expression summary

RNA expression
HPA:14.8TPM
GTEx:11.1RPKM
FANTOM5:56.0Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

14.8
overview Male, age 54 Sample 1
TPM: 15.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 13.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 12.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 14.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 17.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 18.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 15.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 13.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 16.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 10.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 20
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 14.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 11.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

11.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 11.2
Samples: 149

Max RPKM: 19.1
Min RPKM: 6.5
Std RPKM: 1.8
Median RPKM: 11.1
GTEX-12BJ1-2026-SM-5FQUH 60-69 years, male 19.1
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 18.8
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 15.7
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 15.7
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 15.4
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 15.0
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 14.3
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 14.0
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 13.9
GTEX-13CF2-1826-SM-5N9GK 60-69 years, male 13.7
Show all
Colon - Transverse
RPKM: 11.1
Samples: 196

Max RPKM: 73.9
Min RPKM: 5.8
Std RPKM: 5.1
Median RPKM: 10.6
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 73.9
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 23.8
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 21.0
GTEX-12BJ1-2126-SM-5BC5O 60-69 years, male 20.6
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 18.8
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 17.3
GTEX-ZV7C-1526-SM-5NQ72 50-59 years, male 17.1
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 16.8
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 16.5
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 15.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

56.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 56.0
FF:10014-101C5 62,83,84 years, mixed 56.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.