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ESOPHAGUS - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:48.2TPM
GTEx:29.7RPKM
FANTOM5:47.9Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Low
 

Antibody staining

Antibody HPA002640

  

Antibody CAB019291

  

Squamous epithelial cells

 Low   Low  
   
   
   

ESOPHAGUS - HPA RNA-seq

Average TPM

48.2
overview Female, age 70 Sample 1
TPM: 46.5
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 49.6
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 48.4
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

29.7

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 29.7
Samples: 286

Max RPKM: 48.6
Min RPKM: 14.3
Std RPKM: 6.6
Median RPKM: 30.4
GTEX-131XG-1026-SM-5GCMX 50-59 years, female 48.6
GTEX-13RTK-0526-SM-5S2QF 20-29 years, male 47.5
GTEX-11EQ9-0726-SM-5A5K2 30-39 years, male 47.2
GTEX-PWN1-0626-SM-48TDT 40-49 years, female 45.9
GTEX-132AR-2226-SM-5J2NT 50-59 years, female 44.6
GTEX-ZZ64-0226-SM-5E44X 20-29 years, male 43.9
GTEX-S3XE-0926-SM-4AD4S 50-59 years, male 43.8
GTEX-VUSG-1226-SM-4KKZF 50-59 years, male 42.7
GTEX-XXEK-0326-SM-4BRVV 50-59 years, male 42.4
GTEX-U3ZM-0526-SM-4DXTB 40-49 years, male 42.1
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

47.9

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 47.9
FF:10015-101C6 68,74,75 years, mixed 47.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.