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TMTC1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:5.5TPM
GTEx:5.7RPKM
FANTOM5:8.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA016720

  

Endothelial cells

 Medium  

Glandular cells

 High  

Peripheral nerve/ganglion

 Low  
 
 
 

COLON - HPA RNA-seq

Average TPM

5.5
overview Male, age 54 Sample 1
TPM: 4.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 4.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 2.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 7.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 7.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 7.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 6.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 2.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 7.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 2.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 5.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 8.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 4.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

5.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 7.2
Samples: 149

Max RPKM: 15.2
Min RPKM: 1.4
Std RPKM: 2.8
Median RPKM: 7.2
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 15.2
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 15.0
GTEX-117YX-0526-SM-5EGJH 50-59 years, male 13.9
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 13.5
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 13.3
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 13.2
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 13.2
GTEX-13O61-1526-SM-5KM3P 60-69 years, male 12.1
GTEX-ZZ64-0826-SM-5E449 20-29 years, male 12.1
GTEX-ZLV1-1326-SM-4WWER 60-69 years, female 12.0
Show all
Colon - Transverse
RPKM: 4.6
Samples: 196

Max RPKM: 29.3
Min RPKM: 0.4
Std RPKM: 4.0
Median RPKM: 3.2
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 29.3
GTEX-117YX-0826-SM-5H11J 50-59 years, male 16.7
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 14.9
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 14.9
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 14.8
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 14.0
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 14.0
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 13.6
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 12.1
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 11.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

8.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 8.9
FF:10014-101C5 62,83,84 years, mixed 8.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.