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HSD17B4

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:57.2TPM
GTEx:28.7RPKM
FANTOM5:257.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA021302

  

Antibody HPA021311

  

Antibody HPA021479

  

Endothelial cells

 Low   Low   Not detected  

Glandular cells

 High   High   Medium  

Peripheral nerve/ganglion

 Low   Medium  
     
     

COLON - HPA RNA-seq

Average TPM

57.2
overview Male, age 54 Sample 1
TPM: 55.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 30
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 27.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 66.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 15.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 62
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 89.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 66
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 56.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 86.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 79.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 67.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 41.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

28.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 20.4
Samples: 149

Max RPKM: 33.1
Min RPKM: 10.9
Std RPKM: 3.8
Median RPKM: 20.0
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 33.1
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 32.0
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 29.8
GTEX-13CF3-1326-SM-5LZXZ 60-69 years, female 29.5
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 28.9
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 28.4
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 28.3
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 28.1
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 27.9
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 27.3
Show all
Colon - Transverse
RPKM: 35.0
Samples: 196

Max RPKM: 71.4
Min RPKM: 9.0
Std RPKM: 12.2
Median RPKM: 34.4
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 71.4
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 65.3
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 62.2
GTEX-145LT-0926-SM-5LU9C 40-49 years, male 59.9
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 59.8
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 59.0
GTEX-WFG7-1526-SM-4LVMG 20-29 years, male 57.8
GTEX-PLZ5-1126-SM-3P613 50-59 years, male 57.4
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 56.4
GTEX-YF7O-1726-SM-5IFJ9 50-59 years, male 56.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

257.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 257.9
FF:10014-101C5 62,83,84 years, mixed 257.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.