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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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CAMK1
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PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

CAMK1

Gene description

Calcium/calmodulin-dependent protein kinase I

Protein class

Enzymes
Plasma proteins
Predicted intracellular proteins
Predicted membrane proteins

Predicted localization

Intracellular,Membrane

Number of transcripts

3
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Cell line enhanced (HMC-1)
HPA (normal tissue):Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

General cytoplasmic expression in several tissues.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data.

Reliability score

Approved based on 2 antibodies.
HPA051409 , CAB031904
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PROGNOSTIC SUMMARY

Prognostic marker in liver cancer (unfavourable).
Liver cancer p<0.001
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RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA051409
CAB031904

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Most thyroid, breast, colorectal, prostate, liver, pancreatic, endometrial and urothelial generally showed moderate to strong cytoplasmic immunoreactivity. Additional membranous staining was observed in a few cases. The remaining cancers were in general negative.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Moderate cytoplasmic immunoreactivity was observed in squamous cell carcinomas in lung, urothelial, skin and cervical cancers. Remaining cancer cells were in general weakly stained or negative.

GENE INFORMATION

Gene name

CAMK1 (HGNC Symbol)

Synonyms

CaMKI

Description

Calcium/calmodulin-dependent protein kinase I (HGNC Symbol)

Entrez gene summary

Calcium/calmodulin-dependent protein kinase I is expressed in many tissues and is a component of a calmodulin-dependent protein kinase cascade. Calcium/calmodulin directly activates calcium/calmodulin-dependent protein kinase I by binding to the enzyme and indirectly promotes the phosphorylation and synergistic activation of the enzyme by calcium/calmodulin-dependent protein kinase I kinase. [provided by RefSeq, Jul 2008]

Chromosome

3

Cytoband

p25.3

Chromosome location (bp)

9757342 - 9769992

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000134072 (version 83.38)

Entrez gene

8536

UniProt

Q14012 (UniProt - Evidence at protein level)

neXtProt

NX_Q14012

Antibodypedia

CAMK1 antibodies

PROTEIN BROWSER

CAMK1-001
CAMK1-005
CAMK1-006

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

CAMK1-001
ENSP00000256460
ENST00000256460
Q14012 [Direct mapping]
Calcium/calmodulin-dependent protein kinase type 1
B0YIY3 [Target identity:100%; Query identity:100%]
Calcium/calmodulin-dependent protein kinase I, isoform CRA_a; Calcium/calmodulin-dependent protein kinase type 1; cDNA, FLJ95825, Homo sapiens calcium/calmodulin-dependent protein kinase I (CAMK1),mRNA
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Enzymes
   ENZYME proteins
   Transferases
   Kinases
   CAMK Ser/Thr protein kinases
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT-SVM predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Plasma proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004672 [protein kinase activity]
GO:0004683 [calmodulin-dependent protein kinase activity]
GO:0005515 [protein binding]
GO:0005516 [calmodulin binding]
GO:0005524 [ATP binding]
GO:0005622 [intracellular]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0006468 [protein phosphorylation]
GO:0006913 [nucleocytoplasmic transport]
GO:0007049 [cell cycle]
GO:0007165 [signal transduction]
GO:0010976 [positive regulation of neuron projection development]
GO:0032091 [negative regulation of protein binding]
GO:0032880 [regulation of protein localization]
GO:0033138 [positive regulation of peptidyl-serine phosphorylation]
GO:0043393 [regulation of protein binding]
GO:0045944 [positive regulation of transcription from RNA polymerase II promoter]
GO:0046827 [positive regulation of protein export from nucleus]
GO:0051147 [regulation of muscle cell differentiation]
GO:0051149 [positive regulation of muscle cell differentiation]
GO:0051835 [positive regulation of synapse structural plasticity]
GO:0060143 [positive regulation of syncytium formation by plasma membrane fusion]
GO:0060999 [positive regulation of dendritic spine development]
GO:0071902 [positive regulation of protein serine/threonine kinase activity]
GO:1901985 [positive regulation of protein acetylation]
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370 aa
41.3 kDa
No 1
CAMK1-005
ENSP00000393238
ENST00000421120
H7C071 [Direct mapping]
Calcium/calmodulin-dependent protein kinase type 1
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT-SVM predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004672 [protein kinase activity]
GO:0005524 [ATP binding]
GO:0006468 [protein phosphorylation]
Show all
260 aa
28.5 kDa
No 1
CAMK1-006
ENSP00000404587
ENST00000411972
C9JES6 [Direct mapping]
Calcium/calmodulin-dependent protein kinase type 1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004672 [protein kinase activity]
GO:0005524 [ATP binding]
GO:0006468 [protein phosphorylation]
Show all
122 aa
14 kDa
No 0

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