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Gene name

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In atlas

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Method

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MYCN
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PATHOLOGY ATLAS

GENE/PROTEIN

Dictionary

GENERAL INFORMATION

Gene name

MYCN

Gene description

V-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog

Protein class

Cancer-related genes
Disease related genes
Predicted intracellular proteins
Transcription factors

Predicted localization

Intracellular

Number of transcripts

1
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Tissue enhanced (testis cancer)
HPA (cell line):Cell line enhanced (BEWO, HMC-1, NTERA-2, RH-30)
HPA (normal tissue):Tissue enhanced (placenta)

Protein evidence

Evidence at protein level

ANTIBODY IHC RELIABILITY

Reliability score

Pending cancer tissue analysis.

PROGNOSTIC SUMMARY

Gene product is not prognostic.
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RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Tissue enhanced (testis cancer)

PROTEIN EXPRESSION

Pending cancer tissue analysis


STAINING SUMMARY

 

GENE INFORMATION

Gene name

MYCN (HGNC Symbol)

Synonyms

bHLHe37, MYCNOT, N-myc, NMYC

Description

V-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog (HGNC Symbol)

Entrez gene summary

This gene is a member of the MYC family and encodes a protein with a basic helix-loop-helix (bHLH) domain. This protein is located in the nucleus and must dimerize with another bHLH protein in order to bind DNA. Amplification of this gene is associated with a variety of tumors, most notably neuroblastomas. Multiple alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jun 2014]

Chromosome

2

Cytoband

p24.3

Chromosome location (bp)

15940564 - 15947007

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000134323 (version 83.38)

Entrez gene

4613

UniProt

P04198 (UniProt - Evidence at protein level)

neXtProt

NX_P04198

Antibodypedia

MYCN antibodies

PROTEIN BROWSER

MYCN-001

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

MYCN-001
ENSP00000281043
ENST00000281043
P04198 [Direct mapping]
N-myc proto-oncogene protein
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Predicted intracellular proteins
Transcription factors
   Basic domains
Cancer-related genes
   Mutated cancer genes
   COSMIC somatic mutations in cancer genes
   COSMIC Amplifications
   COSMIC Somatic Mutations
Disease related genes
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000785 [chromatin]
GO:0003677 [DNA binding]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0006351 [transcription, DNA-templated]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0006357 [regulation of transcription from RNA polymerase II promoter]
GO:0045893 [positive regulation of transcription, DNA-templated]
GO:0046983 [protein dimerization activity]
Show all
464 aa
49.6 kDa
No 0

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