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AHI1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:7.8TPM
GTEx:3.4RPKM
FANTOM5:34.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA046684

  

Endothelial cells

 Low  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Not detected  
 
 

COLON - HPA RNA-seq

Average TPM

7.8
overview Male, age 54 Sample 1
TPM: 10.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 11
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 4.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 5.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 5.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 7.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 7.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 7.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 7.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 11.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 7.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 8.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

3.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 3.8
Samples: 149

Max RPKM: 12.5
Min RPKM: 2.1
Std RPKM: 1.2
Median RPKM: 3.6
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 12.5
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 8.5
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 7.3
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 7.2
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 6.9
GTEX-X4EO-2726-SM-4E3HS 60-69 years, female 6.4
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 6.1
GTEX-12696-1926-SM-5EGJT 60-69 years, male 5.8
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 5.3
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 5.3
Show all
Colon - Transverse
RPKM: 3.1
Samples: 196

Max RPKM: 10.0
Min RPKM: 1.1
Std RPKM: 1.1
Median RPKM: 2.9
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 10.0
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 9.7
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 7.2
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 5.7
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 5.2
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 5.1
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 5.0
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 5.0
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 4.9
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 4.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

34.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 34.7
FF:10014-101C5 62,83,84 years, mixed 34.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.