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CCDC142

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:1.6TPM
GTEx:2.6RPKM
FANTOM5:5.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA056946

  

Endothelial cells

 Not detected  

Glandular cells

 Not detected  

Peripheral nerve/ganglion

 Not detected  
 
 

COLON - HPA RNA-seq

Average TPM

1.6
overview Male, age 54 Sample 1
TPM: 2.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 1.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 1.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 1.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 1.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 1.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 2.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 1.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 1.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 1.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 1.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

2.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 2.0
Samples: 149

Max RPKM: 3.8
Min RPKM: 0.8
Std RPKM: 0.6
Median RPKM: 1.9
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 3.8
GTEX-V955-1726-SM-4JBHF 60-69 years, male 3.8
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 3.8
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 3.6
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 3.3
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 3.3
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 3.3
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 3.2
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 3.1
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 3.1
Show all
Colon - Transverse
RPKM: 3.1
Samples: 196

Max RPKM: 7.1
Min RPKM: 0.4
Std RPKM: 1.0
Median RPKM: 3.1
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 7.1
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 5.6
GTEX-R55D-1826-SM-48FEF 50-59 years, male 5.4
GTEX-VJYA-2026-SM-4KL1K 60-69 years, male 5.3
GTEX-PLZ5-1126-SM-3P613 50-59 years, male 5.2
GTEX-WHWD-1226-SM-4OOS1 50-59 years, male 5.2
GTEX-131XE-0826-SM-5HL9W 50-59 years, male 4.9
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 4.7
GTEX-QLQW-0426-SM-447A7 30-39 years, male 4.7
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 4.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

5.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 5.7
FF:10014-101C5 62,83,84 years, mixed 5.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.