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CHST5

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:46.8TPM
GTEx:8.8RPKM
FANTOM5:2.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA043804

  

Endothelial cells

 Low  

Glandular cells

 Low  

Peripheral nerve/ganglion

 Not detected  
 
 
 

COLON - HPA RNA-seq

Average TPM

46.8
overview Male, age 54 Sample 1
TPM: 136.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 110.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 65.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 23.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 41.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 17.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 19.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 50.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 16
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 20.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 68.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 10.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 25.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

8.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.5
Samples: 149

Max RPKM: 12.8
Min RPKM: 0.0
Std RPKM: 1.7
Median RPKM: 0.0
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 12.8
GTEX-XBED-1726-SM-47JYO 60-69 years, male 10.7
GTEX-V955-1726-SM-4JBHF 60-69 years, male 10.4
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 5.0
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 4.6
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 3.9
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 3.9
GTEX-ZG7Y-1826-SM-4WWD3 50-59 years, male 3.6
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 3.5
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 2.3
Show all
Colon - Transverse
RPKM: 15.1
Samples: 196

Max RPKM: 67.9
Min RPKM: 0.0
Std RPKM: 14.0
Median RPKM: 13.7
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 67.9
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 52.6
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 49.3
GTEX-O5YW-1426-SM-3MJHF 50-59 years, male 47.1
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 45.6
GTEX-R55G-1226-SM-48FDC 40-49 years, female 44.2
GTEX-S4Q7-0826-SM-4AD5E 20-29 years, male 44.2
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 42.7
GTEX-OHPM-1426-SM-3TW8Y 50-59 years, male 41.4
GTEX-QCQG-1626-SM-48U26 50-59 years, female 38.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

2.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 2.7
FF:10014-101C5 62,83,84 years, mixed 2.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.