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CCDC102A

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:1.2TPM
GTEx:6.4RPKM
FANTOM5:4.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 
 

Antibody staining

Antibody HPA040598

  

Antibody HPA040958

  

Endothelial cells

 Low   High  

Glandular cells

 High   High  

Peripheral nerve/ganglion

 Low  
      
   
   
   

COLON - HPA RNA-seq

Average TPM

1.2
overview Male, age 54 Sample 1
TPM: 2.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 1.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 2.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 1.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 1.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 1.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

6.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 9.5
Samples: 149

Max RPKM: 18.7
Min RPKM: 3.5
Std RPKM: 3.3
Median RPKM: 8.8
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 18.7
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 18.3
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 17.9
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 17.9
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 17.5
GTEX-13N2G-2226-SM-5IJCU 60-69 years, male 16.1
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 16.0
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 15.8
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 15.8
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 15.5
Show all
Colon - Transverse
RPKM: 4.1
Samples: 196

Max RPKM: 12.4
Min RPKM: 0.3
Std RPKM: 2.9
Median RPKM: 3.2
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 12.4
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 11.6
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 11.2
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 11.1
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 10.9
GTEX-11GSP-1626-SM-5986N 60-69 years, female 10.8
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 10.8
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 10.7
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 10.6
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 10.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

4.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 4.2
FF:10014-101C5 62,83,84 years, mixed 4.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.