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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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DNAJB2
  • TISSUE

  • premium

    CELL

  • PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

DNAJB2

Gene description

DnaJ (Hsp40) homolog, subfamily B, member 2

Protein class

Disease related genes
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

7
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Expressed in all
HPA (normal tissue):Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic and nuclear expression in most tissues.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data.

Reliability score

Approved based on 1 antibody.
HPA036268
SHOW MORE

PROGNOSTIC SUMMARY

Prognostic marker in colorectal cancer (unfavourable).
Colorectal cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA036268

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Most cancer tissues showed moderate nuclear membrane with additional cytoplasmic staining in most cases. A few cases of gliomas and squamous cell carcinomas of lung were strongly stained. Most cases of renal cancer were weakly stained or negative.

GENE INFORMATION

Gene name

DNAJB2 (HGNC Symbol)

Synonyms

CMT2T, HSJ1, HSPF3

Description

DnaJ (Hsp40) homolog, subfamily B, member 2 (HGNC Symbol)

Entrez gene summary

This gene is almost exclusively expressed in the brain, mainly in the neuronal layers. It encodes a protein that shows sequence similarity to bacterial DnaJ protein and the yeast homologs. In bacteria, this protein is implicated in protein folding and protein complex dissociation. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Jul 2011]

Chromosome

2

Cytoband

q35

Chromosome location (bp)

219279267 - 219286900

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000135924 (version 83.38)

Entrez gene

3300

UniProt

P25686 (UniProt - Evidence at protein level)

neXtProt

NX_P25686

Antibodypedia

DNAJB2 antibodies

PROTEIN BROWSER

DNAJB2-001
DNAJB2-002
DNAJB2-008
DNAJB2-009
DNAJB2-011
DNAJB2-012
DNAJB2-019

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

DNAJB2-001
ENSP00000338019
ENST00000336576
P25686 [Direct mapping]
DnaJ homolog subfamily B member 2
Q53QD7 [Target identity:100%; Query identity:100%]
DnaJ (Hsp40) homolog, subfamily B, member 2, isoform CRA_a; Putative uncharacterized protein DNAJB2; cDNA, FLJ93128, Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 2 (DNAJB2), mRNA
Show all
Predicted intracellular proteins
Disease related genes
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000502 [proteasome complex]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005829 [cytosol]
GO:0006457 [protein folding]
GO:0006986 [response to unfolded protein]
GO:0016234 [inclusion body]
GO:0030433 [ER-associated ubiquitin-dependent protein catabolic process]
GO:0030544 [Hsp70 protein binding]
GO:0031398 [positive regulation of protein ubiquitination]
GO:0031593 [polyubiquitin binding]
GO:0032436 [positive regulation of proteasomal ubiquitin-dependent protein catabolic process]
GO:0042026 [protein refolding]
GO:0051082 [unfolded protein binding]
GO:0051087 [chaperone binding]
GO:0070628 [proteasome binding]
GO:0090084 [negative regulation of inclusion body assembly]
GO:0090086 [negative regulation of protein deubiquitination]
Show all
324 aa
35.6 kDa
No 0
DNAJB2-002
ENSP00000375936
ENST00000392086
P25686 [Direct mapping]
DnaJ homolog subfamily B member 2
Show all
Predicted intracellular proteins
Disease related genes
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000502 [proteasome complex]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005829 [cytosol]
GO:0006457 [protein folding]
GO:0006986 [response to unfolded protein]
GO:0016234 [inclusion body]
GO:0030433 [ER-associated ubiquitin-dependent protein catabolic process]
GO:0030544 [Hsp70 protein binding]
GO:0031398 [positive regulation of protein ubiquitination]
GO:0031593 [polyubiquitin binding]
GO:0032436 [positive regulation of proteasomal ubiquitin-dependent protein catabolic process]
GO:0042026 [protein refolding]
GO:0051082 [unfolded protein binding]
GO:0051087 [chaperone binding]
GO:0070628 [proteasome binding]
GO:0090084 [negative regulation of inclusion body assembly]
GO:0090086 [negative regulation of protein deubiquitination]
Show all
277 aa
30.6 kDa
No 0
DNAJB2-008
ENSP00000414796
ENST00000425450
C9JRD2 [Direct mapping]
DnaJ homolog subfamily B member 2
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
228 aa
25.4 kDa
No 0
DNAJB2-009
ENSP00000395173
ENST00000421532
E7ETU0 [Direct mapping]
DnaJ homolog subfamily B member 2
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
132 aa
15.1 kDa
No 0
DNAJB2-011
ENSP00000392790
ENST00000442681
C9J1G2 [Direct mapping]
DnaJ homolog subfamily B member 2
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
122 aa
13.8 kDa
No 0
DNAJB2-012
ENSP00000387951
ENST00000439026
C9JX00 [Direct mapping]
DnaJ homolog subfamily B member 2
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
148 aa
16.7 kDa
No 0
DNAJB2-019
ENSP00000375937
ENST00000392087
C9JXB9 [Direct mapping]
DnaJ homolog subfamily B member 2
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
244 aa
26.9 kDa
No 0

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