Tissue expression of SCYL2 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	24.4	TPM
GTEx:	4.8	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Low
Glial cells:	Low
Neuronal cells:	High
Neuropil:	Low

Antibody staining	Antibody HPA021050
Endothelial cells	Low
Glial cells	Low
Neuronal cells	High
Neuropil	Low

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	24.4

Male, age 5

Sample 1
TPM: 24.7

Female, age 40

Sample 2
TPM: 20.1

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 28.3

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	4.8

GTEx sample id

Sample description

RPKM

Brain - Cortex
RPKM: 4.5

Samples: 114

Max RPKM: 7.8
Min RPKM: 2.2
Std RPKM: 0.9
Median RPKM: 4.3

GTEX-UTHO-3026-SM-3GAFB

60-69 years, male

7.8

GTEX-11OF3-2926-SM-5HL78

60-69 years, male

7.5

GTEX-QMR6-1426-SM-32PLA

50-59 years, male

7.4

GTEX-11WQK-3026-SM-5EQL6

50-59 years, male

6.7

GTEX-PVOW-2526-SM-2XCF7

40-49 years, male

6.4

GTEX-13NYC-2826-SM-5K7WR

60-69 years, male

6.2

GTEX-TSE9-3026-SM-3DB76

60-69 years, female

6.2

GTEX-11O72-2926-SM-5BC4V

40-49 years, male

6.1

GTEX-QDT8-2926-SM-32PKC

30-39 years, female

6.0

GTEX-144FL-3026-SM-5O99C

50-59 years, male

5.9

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Brain - Frontal Cortex (BA9)
RPKM: 5.2

Samples: 108

Max RPKM: 11.8
Min RPKM: 2.4
Std RPKM: 1.4
Median RPKM: 5.0

GTEX-QDT8-0011-R10A-SM-32PKG

30-39 years, female

11.8

GTEX-13N2G-0011-R10a-SM-5MR34

60-69 years, male

8.6

GTEX-QVJO-0011-R10A-SM-2S1QJ

60-69 years, female

8.5

GTEX-WWYW-0011-R10A-SM-3NB35

50-59 years, female

8.4

GTEX-WVLH-0011-R10A-SM-3MJFM

50-59 years, male

8.2

GTEX-QMR6-0011-R10A-SM-32PKO

50-59 years, male

8.1

GTEX-QVUS-0011-R10A-SM-3GIK3

60-69 years, female

8.1

GTEX-X585-0011-R10A-SM-46MUY

50-59 years, male

7.6

GTEX-T6MN-0011-R10A-SM-32QP7

50-59 years, male

7.4

GTEX-YFC4-0011-R10a-SM-4SOK5

40-49 years, female

7.4

Show all

CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue