We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
ITM2B
  • TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:404.1TPM
GTEx:170.8RPKM
FANTOM5:1744.9Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA029292

 

Glandular cells

Medium  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

404.1

overview Male, age 65 Sample 1
TPM: 423.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39 Sample 2
TPM: 359.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68 Sample 3
TPM: 426.4
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85 Sample 4
TPM: 406.8

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

170.8

GTEx sample id

Sample description

RPKM

Small Intestine - Terminal Ileum
RPKM: 170.8
Samples: 88

Max RPKM: 249.9
Min RPKM: 110.1
Std RPKM: 32.5
Median RPKM: 167.9
GTEX-1192X-2526-SM-59868 50-59 years, male 249.9
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 249.5
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 249.3
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 247.1
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 223.6
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 219.9
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 218.8
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 218.6
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 218.1
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 215.8
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 213.1
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 207.2
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 200.8
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 200.4
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 199.2
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 197.7
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 196.2
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 195.8
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 195.7
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 194.0
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 193.9
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 192.7
GTEX-13113-1226-SM-5EGHT 60-69 years, female 192.4
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 191.0
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 190.9
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 187.1
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 185.4
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 184.2
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 184.1
GTEX-ZYWO-1526-SM-5SIAL 40-49 years, female 183.4
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 182.9
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 182.9
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 182.7
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 182.5
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 181.6
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 181.2
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 179.7
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 178.8
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 176.9
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 176.1
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 175.8
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 174.8
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 174.0
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 169.6
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 166.2
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 166.0
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 165.4
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 164.0
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 163.4
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 163.0
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 163.0
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 162.9
GTEX-13O61-1326-SM-5KM31 60-69 years, male 161.5
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 154.2
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 153.9
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 153.6
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 152.9
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 152.2
GTEX-111YS-1426-SM-5GID8 60-69 years, male 151.2
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 150.4
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 149.5
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 148.7
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 148.4
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 148.1
GTEX-1122O-1326-SM-5H11F 60-69 years, female 147.2
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 146.8
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 146.2
GTEX-13111-1426-SM-5DUW3 50-59 years, male 145.6
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 144.9
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 143.5
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 143.3
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 139.4
GTEX-ZTSS-0926-SM-59865 40-49 years, male 137.2
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 136.8
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 136.2
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 135.6
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 133.7
GTEX-117YX-0326-SM-5GICL 50-59 years, male 133.6
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 133.5
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 133.0
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 132.2
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 127.1
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 125.4
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 123.7
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 118.5
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 113.5
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 112.9
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 110.1
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

1744.9

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 1744.9
FF:10024-101D6 15,40,85 years, mixed 1744.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.