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GALNT5

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:14.2TPM
GTEx:1.6RPKM
FANTOM5:10.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA008963

  

Antibody HPA009035

  

Endothelial cells

 Not detected   Low  

Glandular cells

 High   High  

Peripheral nerve/ganglion

 Not detected   Low  
   
   
   

COLON - HPA RNA-seq

Average TPM

14.2
overview Male, age 54 Sample 1
TPM: 38.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 19.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 20.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 7.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 5.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 9.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 15.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 10.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 10.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 26.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 6.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 7.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

1.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.0
Samples: 149

Max RPKM: 1.6
Min RPKM: 0.0
Std RPKM: 0.1
Median RPKM: 0.0
GTEX-XBED-1726-SM-47JYO 60-69 years, male 1.6
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 1.0
GTEX-V955-1726-SM-4JBHF 60-69 years, male 0.7
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 0.7
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 0.6
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 0.6
GTEX-13CF2-1826-SM-5N9GK 60-69 years, male 0.3
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 0.3
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 0.2
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 0.2
Show all
Colon - Transverse
RPKM: 2.8
Samples: 196

Max RPKM: 10.0
Min RPKM: 0.0
Std RPKM: 2.3
Median RPKM: 2.9
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 10.0
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 8.3
GTEX-R55G-1226-SM-48FDC 40-49 years, female 7.9
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 7.7
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 7.6
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 7.4
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 7.3
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 7.3
GTEX-133LE-1526-SM-5IFEN 20-29 years, female 7.2
GTEX-QV31-0826-SM-4R1KR 30-39 years, male 7.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

10.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 10.6
FF:10014-101C5 62,83,84 years, mixed 10.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.