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Gene name

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LRRC8A
  • TISSUE

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PATHOLOGY ATLAS

GENE/PROTEIN

Dictionary

GENERAL INFORMATION

Gene name

LRRC8A

Gene description

Leucine rich repeat containing 8 family, member A

Protein class

Disease related genes
Plasma proteins
Potential drug targets
Predicted membrane proteins
Transporters

Predicted localization

Membrane

Number of transcripts

3
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Expressed in all
HPA (normal tissue):Expressed in all

Protein evidence

Evidence at protein level

ANTIBODY IHC RELIABILITY

Reliability score

Pending cancer tissue analysis.

PROGNOSTIC SUMMARY

Prognostic marker in renal cancer (favourable) and pancreatic cancer (unfavourable).
Renal cancer p<0.001
Pancreatic cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Pending cancer tissue analysis


STAINING SUMMARY

 

GENE INFORMATION

Gene name

LRRC8A (HGNC Symbol)

Synonyms

FLJ10337, KIAA1437, LRRC8, SWELL1

Description

Leucine rich repeat containing 8 family, member A (HGNC Symbol)

Entrez gene summary

This gene encodes a protein belonging to the leucine-rich repeat family of proteins, which are involved in diverse biological processes, including cell adhesion, cellular trafficking, and hormone-receptor interactions. This family member is a putative four-pass transmembrane protein that plays a role in B cell development. Defects in this gene cause autosomal dominant non-Bruton type agammaglobulinemia, an immunodeficiency disease resulting from defects in B cell maturation. Multiple alternatively spliced transcript variants, which encode the same protein, have been identified for this gene. [provided by RefSeq, Jul 2008]

Chromosome

9

Cytoband

q34.11

Chromosome location (bp)

128882112 - 128918039

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000136802 (version 83.38)

Entrez gene

56262

UniProt

Q8IWT6 (UniProt - Evidence at protein level)

neXtProt

NX_Q8IWT6

Antibodypedia

LRRC8A antibodies

PROTEIN BROWSER

LRRC8A-001
LRRC8A-002
LRRC8A-201

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

LRRC8A-001
ENSP00000361682
ENST00000372600
Q8IWT6 [Direct mapping]
Volume-regulated anion channel subunit LRRC8A
A0A024R892 [Target identity:100%; Query identity:100%]
Leucine rich repeat containing 8 family, member A, isoform CRA_a
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Plasma proteins
Disease related genes
Potential drug targets
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002329 [pre-B cell differentiation]
GO:0005253 [anion channel activity]
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0006820 [anion transport]
GO:0006884 [cell volume homeostasis]
GO:0006970 [response to osmotic stress]
GO:0009986 [cell surface]
GO:0016020 [membrane]
GO:0034702 [ion channel complex]
GO:0098656 [anion transmembrane transport]
Show all
810 aa
94.2 kDa
No 4
LRRC8A-002
ENSP00000361680
ENST00000372599
Q8IWT6 [Direct mapping]
Volume-regulated anion channel subunit LRRC8A
A0A024R892 [Target identity:100%; Query identity:100%]
Leucine rich repeat containing 8 family, member A, isoform CRA_a
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Plasma proteins
Disease related genes
Potential drug targets
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002329 [pre-B cell differentiation]
GO:0005253 [anion channel activity]
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0006820 [anion transport]
GO:0006884 [cell volume homeostasis]
GO:0006970 [response to osmotic stress]
GO:0009986 [cell surface]
GO:0016020 [membrane]
GO:0034702 [ion channel complex]
GO:0098656 [anion transmembrane transport]
Show all
810 aa
94.2 kDa
No 4
LRRC8A-201
ENSP00000259324
ENST00000259324
Q8IWT6 [Direct mapping]
Volume-regulated anion channel subunit LRRC8A
A0A024R892 [Target identity:100%; Query identity:100%]
Leucine rich repeat containing 8 family, member A, isoform CRA_a
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Plasma proteins
Disease related genes
Potential drug targets
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002329 [pre-B cell differentiation]
GO:0005253 [anion channel activity]
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0006820 [anion transport]
GO:0006884 [cell volume homeostasis]
GO:0006970 [response to osmotic stress]
GO:0009986 [cell surface]
GO:0016020 [membrane]
GO:0034702 [ion channel complex]
GO:0098656 [anion transmembrane transport]
Show all
810 aa
94.2 kDa
No 4

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