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TLN1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:51.0TPM
GTEx:125.1RPKM
FANTOM5:166.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA004748

  

Antibody CAB002006

  

Endothelial cells

 Medium   Not detected  

Glandular cells

 Medium   Medium  

Peripheral nerve/ganglion

 Medium   High  
   
   
   

COLON - HPA RNA-seq

Average TPM

51.0
overview Male, age 54 Sample 1
TPM: 42.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 34.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 23.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 46.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 30.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 124.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 33.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 32.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 93.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 28.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 57.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 70
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 47.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

125.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 171.4
Samples: 149

Max RPKM: 259.7
Min RPKM: 57.2
Std RPKM: 37.3
Median RPKM: 173.8
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 259.7
GTEX-13D11-0626-SM-5LZYY 50-59 years, female 253.3
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 241.7
GTEX-ZQG8-2426-SM-57WEE 60-69 years, female 234.4
GTEX-13FTW-2126-SM-5K7YG 40-49 years, male 234.1
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 232.7
GTEX-12BJ1-2026-SM-5FQUH 60-69 years, male 232.6
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 227.8
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 226.6
GTEX-139T6-1426-SM-5P9J7 50-59 years, male 225.0
Show all
Colon - Transverse
RPKM: 89.9
Samples: 196

Max RPKM: 265.8
Min RPKM: 20.4
Std RPKM: 57.9
Median RPKM: 73.6
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 265.8
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 226.9
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 216.7
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 215.4
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 213.2
GTEX-117YX-0826-SM-5H11J 50-59 years, male 212.6
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 202.3
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 202.1
GTEX-13VXT-2426-SM-5LU46 20-29 years, female 195.8
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 194.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

166.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 166.9
FF:10014-101C5 62,83,84 years, mixed 166.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.