Tissue expression of C6orf52 - Summary - The Human Protein Atlas

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C6orf52

TISSUE

CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	C6orf52
Gene description	Chromosome 6 open reading frame 52
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	5
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Tissue enhanced (testis)
GTEx:	Tissue enriched (testis)
FANTOM5:	Tissue enhanced (testis)

Protein evidence

Evidence at transcript level

Protein expression

Estimation of protein expression could not be performed. View primary data.

DATA RELIABILITY
Data reliability description	RNA-based expert annotation gave inconclusive results. Pending external verification.
Reliability score	Uncertain based on 1 antibody. HPA051142
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

N/A

Cerebral cortex

N/A

Hippocampus

N/A

N/A

Caudate

N/A

N/A

Cerebellum

N/A

N/A

Endocrine tissues

N/A

Thyroid gland

N/A

Parathyroid gland

N/A

Adrenal gland

N/A

Bone marrow & immune system

N/A

Appendix

N/A

Bone marrow

N/A

Lymph node

N/A

Tonsil

N/A

Spleen

N/A

Muscle tissues

N/A

Heart muscle

N/A

Skeletal muscle

N/A

Smooth muscle

N/A

Lung

N/A

Nasopharynx

N/A

N/A

Bronchus

N/A

N/A

Lung

N/A

Liver & gallbladder

N/A

Liver

N/A

Gallbladder

N/A

Pancreas

N/A

Pancreas

N/A

Gastrointestinal tract

N/A

Oral mucosa

N/A

N/A

Salivary gland

N/A

Esophagus

N/A

Stomach

N/A

Duodenum

N/A

Small intestine

N/A

Colon

N/A

Rectum

N/A

Kidney & urinary bladder

N/A

Kidney

N/A

Urinary bladder

N/A

Male tissues

N/A

Testis

N/A

Epididymis

N/A

Prostate

N/A

Seminal vesicle

N/A

Female tissues

N/A

Breast

N/A

Vagina

N/A

N/A

Cervix, uterine

N/A

Endometrium

N/A

Fallopian tube

N/A

Ovary

N/A

Placenta

N/A

Adipose & soft tissue

N/A

Adipose tissue

N/A

Soft tissue

N/A

N/A

Skin

N/A

Skin

N/A

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
RNA-based expert annotation could not be performed, due to inconclusive results. View immunohistochemistry primary data.

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Tissue enhanced (testis)
GTEx dataset Organ Expression Alphabetical RNA tissue category: Tissue enriched (testis)
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Tissue enhanced (testis)

GENE INFORMATION
Gene name	C6orf52
Synonyms
Description	Chromosome 6 open reading frame 52 (HGNC Symbol)
Entrez gene summary
Chromosome	6
Cytoband	p24.2
Chromosome location (bp)	10671418 - 10694797
Protein evidence	Evidence at transcript level (all genes)
Ensembl	ENSG00000137434 (version 83.38)
Entrez gene	347744
UniProt	Q5T4I8 (UniProt - Evidence at transcript level)
neXtProt	NX_Q5T4I8
Antibodypedia	C6orf52 antibodies

PROTEIN BROWSER

C6orf52-001	C6orf52-002	C6orf52-004	C6orf52-005	C6orf52-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
C6orf52-001 ENSP00000368905 ENST00000379586	Q5T4I8 [Direct mapping] Putative uncharacterized protein C6orf52 Show all	Predicted intracellular proteins Show all		65 aa 7.6 kDa	No	0
C6orf52-002 ENSP00000410749 ENST00000426700	Q5T4I8 [Direct mapping] Putative uncharacterized protein C6orf52 Show all	Predicted intracellular proteins Show all		152 aa 17.4 kDa	No	0
C6orf52-004 ENSP00000421264 ENST00000460742	D6RGE8 [Direct mapping] Putative uncharacterized protein C6orf52 Show all	Predicted intracellular proteins Show all		63 aa 7.4 kDa	No	0
C6orf52-005 ENSP00000421837 ENST00000503680	D6RAP8 [Direct mapping] Putative uncharacterized protein C6orf52 Show all	Predicted intracellular proteins Show all		93 aa 10.5 kDa	No	0
C6orf52-201 ENSP00000259983 ENST00000259983	Q5T4I8 [Direct mapping] Putative uncharacterized protein C6orf52 Show all	Predicted intracellular proteins Show all		152 aa 17.4 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.