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FCHSD2

COLON - Expression summary

RNA expression
HPA:14.3TPM
GTEx:7.5RPKM
FANTOM5:31.8Tags Per Million

COLON - Annotated protein expression
 

Antibody staining

Antibody HPA038545

  

Antibody HPA038546

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 High   Medium  

Peripheral nerve/ganglion

 Medium  
   
   

COLON - HPA RNA-seq

Average TPM

14.3
overview Male, age 54 Sample 1
TPM: 13.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 15.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 13.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 11.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 20.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 12.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 13.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 20.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 12.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 15.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 15.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 12.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

7.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 8.6
Samples: 149

Max RPKM: 16.3
Min RPKM: 4.7
Std RPKM: 1.9
Median RPKM: 8.3
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 16.3
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 16.0
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 15.4
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 12.8
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 12.4
GTEX-ZVT3-2826-SM-5GU6A 60-69 years, female 12.4
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 11.9
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 11.7
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 11.6
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 11.6
Show all
Colon - Transverse
RPKM: 6.6
Samples: 196

Max RPKM: 20.6
Min RPKM: 1.6
Std RPKM: 2.6
Median RPKM: 6.0
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 20.6
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 13.8
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 13.2
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 12.9
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 12.8
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 12.7
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 12.2
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 12.2
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 12.2
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 11.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

31.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 31.8
FF:10014-101C5 62,83,84 years, mixed 31.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.