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ACTR1A

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:41.1TPM
GTEx:40.0RPKM
FANTOM5:113.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody CAB037193

  

Endothelial cells

 Medium  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

41.1
overview Male, age 54 Sample 1
TPM: 37.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 26.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 26.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 39.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 25.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 61.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 42.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 40
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 51.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 44.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 47.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 51.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 41.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

40.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 48.5
Samples: 149

Max RPKM: 72.0
Min RPKM: 29.1
Std RPKM: 8.2
Median RPKM: 47.5
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 72.0
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 71.5
GTEX-13O61-1526-SM-5KM3P 60-69 years, male 70.3
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 69.8
GTEX-XUJ4-2126-SM-4BOOX 60-69 years, female 67.4
GTEX-ZLV1-1326-SM-4WWER 60-69 years, female 65.4
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 65.1
GTEX-139T6-1426-SM-5P9J7 50-59 years, male 64.1
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 63.3
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 62.5
Show all
Colon - Transverse
RPKM: 33.4
Samples: 196

Max RPKM: 61.4
Min RPKM: 16.3
Std RPKM: 10.3
Median RPKM: 31.3
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 61.4
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 59.0
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 58.2
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 55.8
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 55.6
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 54.8
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 54.6
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 54.2
GTEX-145ME-0826-SM-5O9AF 40-49 years, female 54.1
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 53.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

113.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 113.0
FF:10014-101C5 62,83,84 years, mixed 113.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.