Expression of BTBD16 in cancer - Summary - The Human Protein Atlas

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BTBD16

TISSUE

CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	BTBD16
Gene description	BTB (POZ) domain containing 16
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	1
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Tissue enriched (urothelial cancer)
HPA (cell line):	Cell line enriched (RT4)
HPA (normal tissue):	Group enriched (skin, testis, urinary bladder)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Estimation of protein expression could not be performed. View primary data.

ANTIBODY IHC RELIABILITY
Data reliability description	RNA-based expert annotation gave inconclusive results. Pending external verification.
Reliability score	Uncertain based on 1 antibody. HPA040529
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PROGNOSTIC SUMMARY
Prognostic marker in renal cancer (unfavourable).
Renal cancer p<0.001 Show all

RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Tissue enriched (urothelial cancer)

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA040529

GENE INFORMATION
Gene name	BTBD16 (HGNC Symbol)
Synonyms	C10orf87, Em:AC061711.1, FLJ25359
Description	BTB (POZ) domain containing 16 (HGNC Symbol)
Entrez gene summary
Chromosome	10
Cytoband	q26.13
Chromosome location (bp)	122271306 - 122338162
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000138152 (version 83.38)
Entrez gene	118663
UniProt	Q32M84 (UniProt - Evidence at transcript level)
neXtProt	NX_Q32M84
Antibodypedia	BTBD16 antibodies

PROTEIN BROWSER

BTBD16-001

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
BTBD16-001 ENSP00000260723 ENST00000260723	Q32M84 [Direct mapping] BTB/POZ domain-containing protein 16 Show all	MEMSAT3 predicted membrane proteins SPOCTOPUS predicted membrane proteins Predicted intracellular proteins Protein evidence (Kim et al 2014) Show all		506 aa 58.5 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.