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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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RBP4
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    TISSUE

  • CELL

  • PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

RBP4

Gene description

Retinol binding protein 4, plasma

Protein class

Cancer-related genes
Disease related genes
Plasma proteins
Predicted intracellular proteins
Predicted secreted proteins

Predicted localization

Intracellular,Secreted

Number of transcripts

5
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Tissue enriched (liver cancer)
HPA (cell line):Cell line enhanced (CACO-2, Hep G2, PC-3)
HPA (normal tissue):Tissue enriched (liver)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression in renal tubules, pancreatic islets and hepatocytes with positivity in plasma.

ANTIBODY IHC RELIABILITY

Data reliability
description

Secreted protein, tissue location of RNA and protein might differ and correlation is complex.

Reliability score

Supported based on 2 antibodies.
HPA001641 , CAB004555
SHOW MORE

PROGNOSTIC SUMMARY

Prognostic marker in liver cancer (favourable) and endometrial cancer (unfavourable).
Liver cancer p<0.001
Endometrial cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Tissue enriched (liver cancer)

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA001641
CAB004555

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Most liver- and renal cancers displayed moderate to strong cytoplasmic immunoreactivity. Remaining malignant tissues were in general weakly stained or negative.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Liver, renal and selected cases of colorectal, breast, prostate, endometrial, testis and urothelial cancers showed moderate to strong cytoplasmic positivity. Remaining malignancies were weakly stained or negative.

GENE INFORMATION

Gene name

RBP4

Synonyms

Description

Retinol binding protein 4, plasma (HGNC Symbol)

Entrez gene summary

This protein belongs to the lipocalin family and is the specific carrier for retinol (vitamin A alcohol) in the blood. It delivers retinol from the liver stores to the peripheral tissues. In plasma, the RBP-retinol complex interacts with transthyretin which prevents its loss by filtration through the kidney glomeruli. A deficiency of vitamin A blocks secretion of the binding protein posttranslationally and results in defective delivery and supply to the epidermal cells. [provided by RefSeq, Jul 2008]

Chromosome

10

Cytoband

q23.33

Chromosome location (bp)

93591687 - 93601744

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000138207 (version 83.38)

Entrez gene

5950

UniProt

P02753 (UniProt - Evidence at protein level)

neXtProt

NX_P02753

Antibodypedia

RBP4 antibodies

PROTEIN BROWSER

RBP4-001
RBP4-002
RBP4-003
RBP4-201
RBP4-202

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

RBP4-001
ENSP00000360519
ENST00000371464
P02753 [Direct mapping]
Retinol-binding protein 4 Plasma retinol-binding protein(1-182) Plasma retinol-binding protein(1-181) Plasma retinol-binding protein(1-179) Plasma retinol-binding protein(1-176)
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Plasma proteins
Cancer-related genes
   Candidate cancer biomarkers
Disease related genes
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001523 [retinoid metabolic process]
GO:0001654 [eye development]
GO:0005215 [transporter activity]
GO:0005501 [retinoid binding]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0005829 [cytosol]
GO:0006094 [gluconeogenesis]
GO:0006810 [transport]
GO:0007507 [heart development]
GO:0007601 [visual perception]
GO:0007603 [phototransduction, visible light]
GO:0016918 [retinal binding]
GO:0019841 [retinol binding]
GO:0030277 [maintenance of gastrointestinal epithelium]
GO:0030324 [lung development]
GO:0032024 [positive regulation of insulin secretion]
GO:0032526 [response to retinoic acid]
GO:0034632 [retinol transporter activity]
GO:0034633 [retinol transport]
GO:0042572 [retinol metabolic process]
GO:0042593 [glucose homeostasis]
GO:0048562 [embryonic organ morphogenesis]
GO:0048706 [embryonic skeletal system development]
GO:0048738 [cardiac muscle tissue development]
GO:0048807 [female genitalia morphogenesis]
GO:0051024 [positive regulation of immunoglobulin secretion]
GO:0060044 [negative regulation of cardiac muscle cell proliferation]
GO:0060059 [embryonic retina morphogenesis in camera-type eye]
GO:0060065 [uterus development]
GO:0060068 [vagina development]
GO:0060157 [urinary bladder development]
GO:0060347 [heart trabecula formation]
GO:0070062 [extracellular exosome]
Show all
201 aa
23 kDa
Yes 0
RBP4-002
ENSP00000360524
ENST00000371469
Q5VY30 [Direct mapping]
Retinol binding protein 4, plasma, isoform CRA_b; Retinol-binding protein 4
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005215 [transporter activity]
GO:0005501 [retinoid binding]
GO:0005576 [extracellular region]
GO:0006810 [transport]
GO:0036094 [small molecule binding]
Show all
199 aa
23 kDa
No 0
RBP4-003
ENSP00000360522
ENST00000371467
P02753 [Direct mapping]
Retinol-binding protein 4 Plasma retinol-binding protein(1-182) Plasma retinol-binding protein(1-181) Plasma retinol-binding protein(1-179) Plasma retinol-binding protein(1-176)
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Plasma proteins
Cancer-related genes
   Candidate cancer biomarkers
Disease related genes
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001523 [retinoid metabolic process]
GO:0001654 [eye development]
GO:0005215 [transporter activity]
GO:0005501 [retinoid binding]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0005829 [cytosol]
GO:0006094 [gluconeogenesis]
GO:0006810 [transport]
GO:0007507 [heart development]
GO:0007601 [visual perception]
GO:0007603 [phototransduction, visible light]
GO:0016918 [retinal binding]
GO:0019841 [retinol binding]
GO:0030277 [maintenance of gastrointestinal epithelium]
GO:0030324 [lung development]
GO:0032024 [positive regulation of insulin secretion]
GO:0032526 [response to retinoic acid]
GO:0034632 [retinol transporter activity]
GO:0034633 [retinol transport]
GO:0042572 [retinol metabolic process]
GO:0042593 [glucose homeostasis]
GO:0043234 [protein complex]
GO:0045471 [response to ethanol]
GO:0046982 [protein heterodimerization activity]
GO:0048562 [embryonic organ morphogenesis]
GO:0048706 [embryonic skeletal system development]
GO:0048738 [cardiac muscle tissue development]
GO:0048807 [female genitalia morphogenesis]
GO:0051024 [positive regulation of immunoglobulin secretion]
GO:0060044 [negative regulation of cardiac muscle cell proliferation]
GO:0060059 [embryonic retina morphogenesis in camera-type eye]
GO:0060065 [uterus development]
GO:0060068 [vagina development]
GO:0060157 [urinary bladder development]
GO:0060347 [heart trabecula formation]
GO:0070062 [extracellular exosome]
Show all
201 aa
23 kDa
Yes 0
RBP4-201
ENSP00000480654
ENST00000615669
A0A0C4DGV7 [Direct mapping]
Retinol-binding protein 4
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005215 [transporter activity]
GO:0005501 [retinoid binding]
GO:0005576 [extracellular region]
GO:0006810 [transport]
GO:0036094 [small molecule binding]
Show all
199 aa
22.9 kDa
Yes 0
RBP4-202
ENSP00000487033
ENST00000629763
Q5VY30 [Direct mapping]
Retinol binding protein 4, plasma, isoform CRA_b; Retinol-binding protein 4
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005215 [transporter activity]
GO:0005501 [retinoid binding]
GO:0005576 [extracellular region]
GO:0006810 [transport]
GO:0036094 [small molecule binding]
Show all
199 aa
23 kDa
No 0

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