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SMALL INTESTINE - Expression summary

RNA expression
HPA:15.2TPM
GTEx:12.4RPKM
FANTOM5:5.7Tags Per Million

SMALL INTESTINE - Annotated protein expression

Pending normal tissue analysis

SMALL INTESTINE - HPA RNA-seq

Average TPM

15.2
overview Male, age 65 Sample 1
TPM: 17
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39 Sample 2
TPM: 12.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68 Sample 3
TPM: 17.9
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85 Sample 4
TPM: 13.9

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

12.4

GTEx sample id

Sample description

RPKM
Small Intestine - Terminal Ileum
RPKM: 12.4
Samples: 88

Max RPKM: 42.8
Min RPKM: 5.6
Std RPKM: 6.2
Median RPKM: 10.6
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 42.8
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 30.3
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 29.6
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 25.4
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 23.3
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 22.9
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 22.9
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 20.9
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 19.5
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 19.4
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

5.7

FANTOM5 sample id

Sample description

Tags Per Million
Small intestine
Tags Per Million: 5.7
FF:10024-101D6 15,40,85 years, mixed 5.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.