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Term
Gene name

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Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

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Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

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Category

Score

Score

Score

Antibodies

Column

 
 
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PATHOLOGY ATLAS GLIOMA

GENE/PROTEIN

Antibody validation

Dictionary

Glioma

GLIOMA - Survival analysis

Best separation

Median separation

Expression cutoff

8.7 FPKM 16.7 FPKM

3-year survival high

9% 11%

3-year survival low

0% 2%

Log-rank P value

3.36e-2 3.84e-1

Interactive survival scatter plot (individual patient data)




Stage:

TCGA RNA samples

Average FPKM

21.4

Number of samples

153

Samples

Sample

Description

FPKM

TCGA-19-5960-01A 56 years, male, white 173.2
TCGA-41-5651-01A 59 years, female, black or african american 102.0
TCGA-08-0386-01A 74 years, male, white 65.2
TCGA-02-2483-01A 43 years, male, asian 65.1
TCGA-12-0618-01A 49 years, male, white 60.5
TCGA-02-2485-01A 53 years, male, black or african american 60.0
TCGA-76-4929-01A 76 years, female, white 54.2
TCGA-06-5859-01A 63 years, male, white 52.6
TCGA-14-0790-01B 64 years, female, white 51.8
TCGA-27-2526-01A 79 years, female, white 46.9
TCGA-27-2521-01A 34 years, male, white 45.4
TCGA-06-0747-01A 53 years, male, white 45.3
TCGA-06-0129-01A 30 years, male, asian 45.0
TCGA-06-1804-01A 81 years, female, white 40.2
TCGA-06-2558-01A 75 years, female, white 39.9
TCGA-06-2567-01A 65 years, male, white 39.7
TCGA-06-0174-01A 54 years, male, white 38.9
TCGA-12-0821-01A 62 years, male, white 37.6
TCGA-26-5132-01A 74 years, male, white 37.5
TCGA-06-0744-01A 67 years, male, white 37.0
TCGA-28-5207-01A 71 years, male, white 36.1
TCGA-32-1970-01A 59 years, male, white 36.0
TCGA-12-1597-01B 62 years, female, white 36.0
TCGA-06-0178-01A 39 years, male, white 35.8
TCGA-06-5416-01A 23 years, female, white 35.3
TCGA-06-2570-01A 21 years, female, white 34.8
TCGA-06-0238-01A 46 years, male, white 34.5
TCGA-26-5136-01B 78 years, female, white 34.1
TCGA-26-5134-01A 74 years, male, white 34.0
TCGA-26-5135-01A 72 years, female, white 33.7
TCGA-28-5204-01A 72 years, male, white 33.3
TCGA-27-2523-01A 63 years, male, white 32.9
TCGA-32-2616-01A 48 years, female, white 32.4
TCGA-06-0686-01A 53 years, male, white 32.3
TCGA-06-0157-01A 63 years, female, white 31.9
TCGA-28-5220-01A 67 years, male, white 31.8
TCGA-12-3650-01A 46 years, male, white 31.7
TCGA-41-2571-01A 89 years, male, white 31.5
TCGA-06-2564-01A 50 years, male, white 30.7
TCGA-06-0745-01A 59 years, male, white 30.4
TCGA-15-0742-01A 65 years, male, white 29.3
TCGA-06-5858-01A 45 years, female, white 29.0
TCGA-76-4931-01A 70 years, female, white 29.0
TCGA-14-0787-01A 69 years, male, asian 28.6
TCGA-19-2624-01A 51 years, male, white 28.5
TCGA-28-1747-01C 44 years, male, white 28.5
TCGA-19-1390-01A 63 years, female, white 28.2
TCGA-26-5133-01A 59 years, male, white 27.7
TCGA-06-2559-01A 83 years, male, white 27.7
TCGA-06-5417-01A 45 years, female, white 26.9
TCGA-19-2619-01A 55 years, female, black or african american 26.6
TCGA-06-0743-01A 69 years, male, white 26.2
TCGA-76-4932-01A 50 years, female, white 25.9
TCGA-19-2629-01A 60 years, male, white 25.8
TCGA-15-1444-01A 21 years, male, white 25.7
TCGA-06-0168-01A 59 years, female, white 24.7
TCGA-14-1825-01A 70 years, male, white 24.3
TCGA-27-1834-01A 56 years, male, white 23.5
TCGA-06-2561-01A 53 years, female, white 23.3
TCGA-27-2528-01A 62 years, male, white 23.1
TCGA-06-5856-01A 58 years, male, white 22.4
TCGA-19-2620-01A 70 years, male, white 21.9
TCGA-06-0156-01A 57 years, male, white 21.5
TCGA-12-5299-01A 56 years, female, white 21.5
TCGA-06-2565-01A 59 years, male, asian 21.4
TCGA-06-0138-01A 43 years, male, white 21.1
TCGA-06-0158-01A 73 years, male, white 20.9
TCGA-26-1442-01A 43 years, male, white 20.6
TCGA-06-5413-01A 67 years, male, white 20.3
TCGA-14-0817-01A 69 years, female, white 18.3
TCGA-06-0219-01A 67 years, male, white 18.0
TCGA-28-1753-01A 53 years, male, white 17.9
TCGA-27-1837-01A 36 years, male, white 17.2
TCGA-28-5213-01A 72 years, male, white 17.2
TCGA-06-5408-01A 54 years, female, white 16.9
TCGA-16-0846-01A 85 years, male, white 16.8
TCGA-27-1831-01A 66 years, male, white 16.7
TCGA-06-0211-01B 47 years, male, white 16.6
TCGA-28-5215-01A 62 years, female, white 15.9
TCGA-26-5139-01A 65 years, female, white 15.5
TCGA-76-4925-01A 76 years, male, white 15.3
TCGA-14-2554-01A 52 years, female, white 15.3
TCGA-14-1823-01A 58 years, female, white 15.2
TCGA-32-2634-01A 82 years, male, white 14.0
TCGA-06-0749-01A 50 years, male, black or african american 13.9
TCGA-28-5216-01A 52 years, male, white 13.9
TCGA-06-5411-01A 51 years, male, white 13.8
TCGA-06-0649-01B 73 years, female, black or african american 13.2
TCGA-76-4926-01B 68 years, male, white 13.1
TCGA-76-4927-01A 58 years, male, white 13.0
TCGA-28-5208-01A 52 years, male, white 12.8
TCGA-06-2563-01A 72 years, female, white 12.6
TCGA-32-2615-01A 62 years, male, white 12.6
TCGA-06-0132-01A 49 years, male, white 12.5
TCGA-12-0619-01A 60 years, male, white 12.0
TCGA-12-0616-01A 36 years, female, white 11.9
TCGA-06-0882-01A 30 years, male, white 11.8
TCGA-02-0047-01A 78 years, male, white 11.7
TCGA-14-1034-01A 60 years, female 11.1
TCGA-27-2519-01A 48 years, male, white 10.6
TCGA-32-4213-01A 47 years, female, white 10.0
TCGA-32-2632-01A 80 years, male, white 9.9
TCGA-27-1830-01A 57 years, male, white 9.8
TCGA-12-5295-01A 60 years, female, white 9.8
TCGA-41-3915-01A 48 years, male, white 9.5
TCGA-14-1829-01A 57 years, male, black or african american 9.4
TCGA-06-2557-01A 76 years, male, black or african american 9.4
TCGA-06-0187-01A 69 years, male, white 9.3
TCGA-06-5418-01A 75 years, female, white 9.3
TCGA-28-2509-01A 77 years, female, white 9.0
TCGA-28-5209-01A 66 years, female, white 8.9
TCGA-06-5414-01A 61 years, male, white 8.9
TCGA-12-3652-01A 60 years, male, white 8.8
TCGA-06-0645-01A 56 years, female, white 8.8
TCGA-06-0125-01A 63 years, female, white 8.7
TCGA-32-1980-01A 72 years, male, white 8.7
TCGA-06-0750-01A 43 years, male, white 8.6
TCGA-32-2638-01A 67 years, male, white 8.6
TCGA-32-5222-01A 66 years, male, white 8.6
TCGA-32-1982-01A 76 years, female, white 8.5
TCGA-41-4097-01A 63 years, female, white 8.4
TCGA-12-3653-01A 34 years, female, white 8.0
TCGA-76-4928-01B 85 years, female, white 7.6
TCGA-27-2524-01A 56 years, male, white 7.2
TCGA-06-2562-01A 81 years, male, white 7.2
TCGA-06-0646-01A 61 years, male, white 7.1
TCGA-28-2514-01A 45 years, male, asian 6.7
TCGA-06-0210-01A 72 years, female, white 6.6
TCGA-28-2499-01A 59 years, male, white 6.2
TCGA-16-1045-01B 49 years, female, white 5.4
TCGA-06-0878-01A 74 years, male, white 5.3
TCGA-27-1835-01A 53 years, female, white 4.5
TCGA-06-0141-01A 62 years, male, white 4.1
TCGA-14-0789-01A 54 years, male, white 4.0
TCGA-19-2625-01A 76 years, female, white 3.9
TCGA-19-1787-01B 49 years, male, white 3.6
TCGA-06-0184-01A 63 years, male, white 3.3
TCGA-14-0781-01B 49 years, male, black or african american 3.1
TCGA-19-4065-01A 36 years, male, white 3.1
TCGA-28-2513-01A 69 years, female, white 2.3
TCGA-06-0190-01A 62 years, male, white 2.0
TCGA-14-0871-01A 75 years, female, white 2.0
TCGA-41-2572-01A 67 years, male, white 1.8
TCGA-06-0139-01A 40 years, male, white 1.8
TCGA-06-5412-01A 78 years, female, white 1.7
TCGA-06-5410-01A 72 years, female, white 1.5
TCGA-27-1832-01A 59 years, female, white 0.5
TCGA-06-0644-01A 71 years, male, black or african american 0.5
TCGA-02-2486-01A 64 years, male, white 0.4
TCGA-06-0130-01A 54 years, male, white 0.4
TCGA-28-5218-01A 63 years, male, white 0.3
TCGA-06-2569-01A 24 years, female, black or african american 0.3
TCGA-02-0055-01A 62 years, female, white 0.3
Show all

GLIOMA - Protein expression

 

Antibody HPA029217

 Antibody staining
  High
  Medium
  Low
  Not detected
  
 Intensity
  Strong
  Moderate
  Weak
  Negative
  
 Quantity
  >75%
  75%-25%
  <25%
  Rare
  Negative
  
 Location
  Cytoplasmic/membranous,nuclear
  Cytoplasmic/membranous
  Nuclear
  None
  

Click images for details

























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