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SRRM4

GENERAL INFORMATION

Gene name

 SRRM4

Gene description

 Serine/arginine repetitive matrix 4

Protein class

 Predicted intracellular proteins

Predicted localization

 Intracellular

Number of transcripts

 1
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category
HPA:Tissue enriched (cerebral cortex)
GTEx:Group enriched (cerebellum, cerebral cortex)
FANTOM5:Tissue enriched (cerebellum)

Protein evidence

 Evidence at protein level

Protein expression

 Estimation of protein expression could not be performed. View primary data.

DATA RELIABILITY

Data reliability
description

 RNA-based expert annotation gave inconclusive results.

Reliability score

 Uncertain based on 1 antibody.
HPA052783
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RNA AND PROTEIN EXPRESSION SUMMARY
RNA expression (TPM) Protein expression (score)
Brain
N/A
Hippocampus
N/A
N/A
Caudate
N/A
N/A
Cerebellum
N/A
N/A
Endocrine tissues
N/A
Bone marrow & immune system
N/A
Appendix
N/A
Tonsil
N/A
Spleen
N/A
Muscle tissues
N/A
Lung
N/A
Nasopharynx
N/A
N/A
Bronchus
N/A
N/A
Lung
N/A
Liver & gallbladder
N/A
Liver
N/A
Pancreas
N/A
Pancreas
N/A
Gastrointestinal tract
N/A
Oral mucosa
N/A
N/A
Esophagus
N/A
Stomach
N/A
Duodenum
N/A
Colon
N/A
Rectum
N/A
Kidney & urinary bladder
N/A
Kidney
N/A
Male tissues
N/A
Testis
N/A
Prostate
N/A
Female tissues
N/A
Breast
N/A
Vagina
N/A
N/A
Ovary
N/A
Placenta
N/A
Adipose & soft tissue
N/A
Soft tissue
N/A
N/A
Skin
N/A
Skin
N/A
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW
RNA-based expert annotation could not be performed, due to inconclusive results. View immunohistochemistry primary data.

RNA EXPRESSION OVERVIEW
HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enriched (cerebral cortex)
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Group enriched (cerebellum, cerebral cortex)
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enriched (cerebellum)

GENE INFORMATION

Gene name

 SRRM4 (HGNC Symbol)

Synonyms

 KIAA1853, nSR100

Description

 Serine/arginine repetitive matrix 4 (HGNC Symbol)

Entrez gene summary

 SRRM4 promotes alternative splicing and inclusion of neural-specific exons in target mRNAs (Calarco et al., 2009 [PubMed 19737518]).[supplied by OMIM, Oct 2009]

Chromosome

 12

Cytoband

 q24.23

Chromosome location (bp)

 118981495 - 119163051

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000139767 (version 83.38)

Entrez gene

 84530

UniProt

 A7MD48 (UniProt - Evidence at protein level)

neXtProt

 NX_A7MD48

Antibodypedia

 SRRM4 antibodies

PROTEIN BROWSER
SRRM4-001

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
SRRM4-001
ENSP00000267260
ENST00000267260
A7MD48 [Direct mapping]
Serine/arginine repetitive matrix protein 4
V5T9A0 [Target identity:100%; Query identity:100%]
Serine/arginine repetitive matrix 4
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Predicted intracellular proteins
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GO:0000381 [regulation of alternative mRNA splicing, via spliceosome]
GO:0003729 [mRNA binding]
GO:0005634 [nucleus]
GO:0006397 [mRNA processing]
GO:0007399 [nervous system development]
GO:0007605 [sensory perception of sound]
GO:0008380 [RNA splicing]
GO:0030154 [cell differentiation]
GO:0043484 [regulation of RNA splicing]
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 611 aa
68.6 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.