Tissue expression of LYSMD2 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	8.8	TPM
GTEx:	5.1	RPKM
FANTOM5:	1.5	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Medium
Peripheral nerve:	Low

Antibody staining	Antibody HPA040460
Adipocytes	Not detected
Fibroblasts	Medium
Peripheral nerve	Low

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Low

Antibody staining	Antibody HPA040460
Adipocytes	Not detected
Fibroblasts	Low

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	8.8

Female, age 80

Sample 1
TPM: 8.8

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 4.5

Female, age 57

Sample 3
TPM: 5.7

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 16.5

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 8.6

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	5.1

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 4.6

Samples: 350

Max RPKM: 11.7
Min RPKM: 1.6
Std RPKM: 1.6
Median RPKM: 4.4

GTEX-147GR-0426-SM-5S2OL

60-69 years, male

11.7

GTEX-13O61-2426-SM-5J1NV

60-69 years, male

10.4

GTEX-13NZ9-0526-SM-5J1OX

50-59 years, male

9.8

GTEX-ZE9C-2826-SM-5S2MO

60-69 years, male

9.6

GTEX-ZE7O-0226-SM-5S2N1

50-59 years, female

9.4

GTEX-13G51-2626-SM-5LZYW

60-69 years, male

9.3

GTEX-XK95-0426-SM-4AT4R

40-49 years, male

9.1

GTEX-13OW8-1226-SM-5K7XD

60-69 years, male

8.8

GTEX-13VXU-0226-SM-5SI9R

50-59 years, male

8.5

GTEX-145MF-0526-SM-5LUA6

50-59 years, male

8.5

Show all

Adipose - Visceral (Omentum)
RPKM: 6.0

Samples: 227

Max RPKM: 14.8
Min RPKM: 1.4
Std RPKM: 2.2
Median RPKM: 5.7

GTEX-13IVO-2426-SM-5K7V9

70-79 years, male

14.8

GTEX-11NV4-1426-SM-5BC4W

60-69 years, male

12.6

GTEX-13NYS-0726-SM-5J1OR

60-69 years, male

12.3

GTEX-12ZZX-1726-SM-5BC63

40-49 years, female

12.0

GTEX-145MI-0826-SM-5SI95

60-69 years, female

11.4

GTEX-ZAB5-1126-SM-5Q5AD

50-59 years, male

11.0

GTEX-ZXG5-1626-SM-59HJK

60-69 years, male

10.5

GTEX-14A6H-1026-SM-5SIAZ

30-39 years, male

10.4

GTEX-13NZ9-2026-SM-5KM1U

50-59 years, male

10.1

GTEX-13VXU-1026-SM-5KLZE

50-59 years, male

10.1

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	1.5

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 1.5

FF:10010-101C1

65,65,76 years, mixed

1.5