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Term
Gene name

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Subclass

Chromosome

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In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

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Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

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ADAMTS18
  • TISSUE

  • CELL

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TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

ADAMTS18

Gene description

ADAM metallopeptidase with thrombospondin type 1 motif, 18

Protein class

Cancer-related genes
Disease related genes
Enzymes
Potential drug targets
Predicted intracellular proteins
Predicted secreted proteins

Predicted localization

Intracellular,Secreted

Number of transcripts

3
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Tissue enriched (placenta)
GTEx:Tissue enriched (cerebellum)
FANTOM5:Group enriched (adipose tissue, cerebellum)

Protein evidence

Evidence at protein level

Protein expression

Ubiquitous cytoplasmic expression, most abundant in extravillous trophoblasts and CNS.

DATA RELIABILITY

Data reliability
description

Secreted protein, tissue location of RNA and protein might differ and correlation is complex. Pending external verification.

Reliability score

Uncertain based on 1 antibody.
HPA044326
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

Placenta

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enriched (placenta)
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enriched (cerebellum)
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Group enriched (adipose tissue, cerebellum)

GENE INFORMATION

Gene name

ADAMTS18 (HGNC Symbol)

Synonyms

ADAMTS21

Description

ADAM metallopeptidase with thrombospondin type 1 motif, 18 (HGNC Symbol)

Entrez gene summary

This gene encodes a member of the ADAMTS (a disintegrin and metalloproteinase with thrombospondin motifs) protein family. ADAMTS family members share several distinct protein modules, including a propeptide region, a metalloproteinase domain, a disintegrin-like domain, and a thrombospondin type 1 (TS) motif. Individual members of this family differ in the number of C-terminal TS motifs, and some have unique C-terminal domains. The protein encoded by this gene has a high sequence similarity to the protein encoded by gene ADAMTS16, another family member. It is thought to function as a tumor suppressor. Alternatively spliced transcript variants have been identified, but their biological validity has not been determined. [provided by RefSeq, Jul 2008]

Chromosome

16

Cytoband

q23.1

Chromosome location (bp)

77247813 - 77435114

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000140873 (version 83.38)

Entrez gene

170692

UniProt

Q8TE60 (UniProt - Evidence at protein level)

neXtProt

NX_Q8TE60

Antibodypedia

ADAMTS18 antibodies

PROTEIN BROWSER

ADAMTS18-001
ADAMTS18-009
ADAMTS18-011

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

ADAMTS18-001
ENSP00000282849
ENST00000282849
Q8TE60 [Direct mapping]
A disintegrin and metalloproteinase with thrombospondin motifs 18
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Enzymes
   Peptidases
   Metallopeptidases
   SCAMPI predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Cancer-related genes
   Candidate cancer biomarkers
Disease related genes
Potential drug targets
Show all
GO:0001654 [eye development]
GO:0004222 [metalloendopeptidase activity]
GO:0005578 [proteinaceous extracellular matrix]
GO:0006508 [proteolysis]
GO:0008233 [peptidase activity]
GO:0008270 [zinc ion binding]
GO:0031012 [extracellular matrix]
GO:0090331 [negative regulation of platelet aggregation]
Show all
1221 aa
135.2 kDa
Yes 0
ADAMTS18-009
ENSP00000457395
ENST00000562345
H3BTZ3 [Direct mapping]
A disintegrin and metalloproteinase with thrombospondin motifs 18
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Predicted intracellular proteins
Show all
GO:0004222 [metalloendopeptidase activity]
GO:0006508 [proteolysis]
GO:0008270 [zinc ion binding]
Show all
186 aa
20.9 kDa
No 0
ADAMTS18-011
ENSP00000454368
ENST00000562332
H3BMG1 [Direct mapping]
A disintegrin and metalloproteinase with thrombospondin motifs 18
Show all
Predicted intracellular proteins
Show all
62 aa
6.7 kDa
No 0

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