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SAT2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:14.5TPM
GTEx:55.3RPKM
FANTOM5:135.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA022136

  

Antibody HPA057096

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Low   Not detected  

Peripheral nerve/ganglion

 Low   Low  
   
   
   

COLON - HPA RNA-seq

Average TPM

14.5
overview Male, age 54 Sample 1
TPM: 15.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 14.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 11.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 20.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 14.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 13.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 14.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 13.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 14
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 13.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 15.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 13.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 15.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

55.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 63.3
Samples: 149

Max RPKM: 127.2
Min RPKM: 31.5
Std RPKM: 14.8
Median RPKM: 64.1
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 127.2
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 103.5
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 93.8
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 93.1
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 92.4
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 88.6
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 88.2
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 87.2
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 86.6
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 86.4
Show all
Colon - Transverse
RPKM: 49.2
Samples: 196

Max RPKM: 90.8
Min RPKM: 22.7
Std RPKM: 13.1
Median RPKM: 46.9
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 90.8
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 85.4
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 85.0
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 84.6
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 82.1
GTEX-S341-1426-SM-4AD6U 40-49 years, female 81.7
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 81.5
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 80.2
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 79.7
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 79.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

135.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 135.5
FF:10014-101C5 62,83,84 years, mixed 135.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.