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MBD1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:19.0TPM
GTEx:15.9RPKM
FANTOM5:25.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody CAB009017

  

Antibody CAB036003

  

Endothelial cells

 Not detected   High  

Glandular cells

 Medium   Medium  

Peripheral nerve/ganglion

 Not detected   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

19.0
overview Male, age 54 Sample 1
TPM: 23.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 19.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 16.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 18.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 14.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 19
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 15
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 21.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 20.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 18
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 21.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 23
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 18.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

15.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 16.2
Samples: 149

Max RPKM: 23.7
Min RPKM: 10.2
Std RPKM: 2.6
Median RPKM: 16.2
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 23.7
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 23.3
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 22.3
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 22.0
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 21.6
GTEX-V955-1726-SM-4JBHF 60-69 years, male 21.3
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 20.7
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 20.7
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 20.4
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 20.2
Show all
Colon - Transverse
RPKM: 15.7
Samples: 196

Max RPKM: 26.5
Min RPKM: 10.3
Std RPKM: 2.2
Median RPKM: 15.3
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 26.5
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 22.1
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 21.8
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 21.0
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 20.5
GTEX-WHWD-1226-SM-4OOS1 50-59 years, male 20.5
GTEX-131XE-0826-SM-5HL9W 50-59 years, male 20.1
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 20.0
GTEX-XQ8I-2126-SM-4BOOM 50-59 years, male 19.8
GTEX-12KS4-2426-SM-5LU8P 30-39 years, male 19.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

25.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 25.6
FF:10014-101C5 62,83,84 years, mixed 25.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.