Expression of CTB-55O6.8 in cancer - Summary - The Human Protein Atlas

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CTB-55O6.8

TISSUE

CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	CTB-55O6.8
Gene description	Uncharacterized protein LOC113230
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	3
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Expressed in all
HPA (cell line):	Cell line enhanced (Karpas-707, RPMI-8226)
HPA (normal tissue):	Mixed

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Estimation of protein expression could not be performed. View primary data.

ANTIBODY IHC RELIABILITY
Data reliability description	RNA-based expert annotation gave inconclusive results. Pending external verification.
Reliability score	Uncertain based on 1 antibody. HPA042225
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PROGNOSTIC SUMMARY
Prognostic marker in stomach cancer (favourable) and renal cancer (favourable).
Stomach cancer p<0.001 Renal cancer p<0.001 Show all

RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA042225

GENE INFORMATION
Gene name	CTB-55O6.8
Synonyms
Description	Uncharacterized protein LOC113230 (UniProtKB/Swiss-Prot)
Entrez gene summary
Chromosome	19
Cytoband	p13.12
Chromosome location (bp)	14072536 - 14075062
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000141854 (version 83.38)
Entrez gene	113230
UniProt	Q96FF7 (UniProt - Evidence at transcript level)
neXtProt	NX_Q96FF7
Antibodypedia	CTB-55O6.8 antibodies

PROTEIN BROWSER

CTB-55O6.8-001	CTB-55O6.8-003	CTB-55O6.8-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
CTB-55O6.8-001 ENSP00000465157 ENST00000587086	Q96FF7 [Target identity:100%; Query identity:100%] Uncharacterized protein LOC113230 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		219 aa 24 kDa	No	0
CTB-55O6.8-003 ENSP00000466176 ENST00000590772	K7ELQ6 [Direct mapping] Protein LOC113230 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		150 aa 15.1 kDa	No	0
CTB-55O6.8-201 ENSP00000269720 ENST00000269720	A0A044PY82 [Direct mapping] Protein LOC113230 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		361 aa 39 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.