Tissue expression of APP - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	197.8	TPM
GTEx:	47.2	RPKM
FANTOM5:	263.3	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Not detected

Antibody staining	Antibody HPA001462	Antibody CAB000157
Squamous epithelial cells	Not detected	Not detected

ESOPHAGUS - HPA RNA-seq

Average TPM	197.8

Female, age 70

Sample 1
TPM: 143

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 274.2

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 176.1

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	47.2

GTEx sample id

Sample description

RPKM

Esophagus - Mucosa
RPKM: 47.2

Samples: 286

Max RPKM: 111.7
Min RPKM: 18.3
Std RPKM: 17.4
Median RPKM: 44.3

GTEX-RUSQ-0826-SM-47JWW

50-59 years, male

111.7

GTEX-ZT9X-0526-SM-5GCOP

40-49 years, male

111.2

GTEX-WEY5-0926-SM-4LMI4

40-49 years, female

102.2

GTEX-P4PP-0626-SM-3NM9X

30-39 years, female

102.0

GTEX-144GO-2726-SM-5O9A2

60-69 years, male

96.7

GTEX-13X6I-1026-SM-5LU4C

60-69 years, male

93.3

GTEX-R45C-1226-SM-48FEE

60-69 years, female

91.6

GTEX-TMMY-1126-SM-4DXSX

40-49 years, female

89.5

GTEX-13CF3-1626-SM-5IFG9

60-69 years, female

88.7

GTEX-XV7Q-1126-SM-4BRVS

40-49 years, female

86.7

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	263.3

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 263.3

FF:10015-101C6

68,74,75 years, mixed

263.3