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RAB13

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:65.5TPM
GTEx:30.9RPKM
FANTOM5:56.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA003996

  

Endothelial cells

 Low  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Low  
 
 
 

COLON - HPA RNA-seq

Average TPM

65.5
overview Male, age 54 Sample 1
TPM: 98.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 57.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 51.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 60.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 68.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 74.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 63.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 50.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 72.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 64
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 61.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 65.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 62.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

30.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 35.9
Samples: 149

Max RPKM: 65.5
Min RPKM: 19.6
Std RPKM: 9.0
Median RPKM: 34.1
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 65.5
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 65.4
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 64.7
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 61.3
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 61.2
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 59.0
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 57.9
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 55.0
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 54.6
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 53.6
Show all
Colon - Transverse
RPKM: 27.1
Samples: 196

Max RPKM: 88.9
Min RPKM: 10.8
Std RPKM: 10.1
Median RPKM: 23.8
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 88.9
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 59.8
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 58.4
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 57.0
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 54.9
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 52.4
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 51.3
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 48.8
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 48.0
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 46.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

56.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 56.2
FF:10014-101C5 62,83,84 years, mixed 56.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.