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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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ARL8A
  • TISSUE

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PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

ARL8A

Gene description

ADP-ribosylation factor-like 8A

Protein class

Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

2
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Expressed in all
HPA (normal tissue):Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression of varying intensity in most tissues.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data. Caution, targets protein from more than one gene.

Reliability score

Approved based on 3 antibodies.
HPA038759 , HPA040515 , HPA045924
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PROGNOSTIC SUMMARY

Prognostic marker in colorectal cancer (unfavourable).
Colorectal cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA038759
HPA040515
HPA045924

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Several cases of pancreatic cancers and malignant gliomas along with a few cases of malignant melanomas, prostate, breast and testicular cancers displayed moderate cytoplasmic positivity. Remaining malignant cells were weakly stained or negative.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Malignant cells generally showed weak cytoplasmic staining or were negative. Moderate cytoplasmic positivity was observed in several cases of lung cancers, malignant melanoma, thyroid cancers, a few cases of malignant glioma and colorectal cancers. A single case each of duct carcinoma of breast, malignant carcinoid and malignant glioma exhibited strong positivity.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Most malignant cells displayed weak to moderate cytoplasmic staining. Rare case of malignant glioma displayed strong cytoplasmic staining. Several cases of liver, pancreatic, gastric, renal, urothelial, ovarian and endometrial cancers were negative.

GENE INFORMATION

Gene name

ARL8A (HGNC Symbol)

Synonyms

ARL10B, FLJ45195, Gie2

Description

ADP-ribosylation factor-like 8A (HGNC Symbol)

Entrez gene summary

Chromosome

1

Cytoband

q32.1

Chromosome location (bp)

202133404 - 202144743

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000143862 (version 83.38)

Entrez gene

127829

UniProt

Q96BM9 (UniProt - Evidence at protein level)

neXtProt

NX_Q96BM9

Antibodypedia

ARL8A antibodies

PROTEIN BROWSER

ARL8A-001
ARL8A-201

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

ARL8A-001
ENSP00000272217
ENST00000272217
Q96BM9 [Direct mapping]
ADP-ribosylation factor-like protein 8A
A0A024R977 [Target identity:100%; Query identity:100%]
ADP-ribosylation factor-like 8A, isoform CRA_a
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003924 [GTPase activity]
GO:0005515 [protein binding]
GO:0005525 [GTP binding]
GO:0005622 [intracellular]
GO:0005737 [cytoplasm]
GO:0005765 [lysosomal membrane]
GO:0006886 [intracellular protein transport]
GO:0007059 [chromosome segregation]
GO:0007067 [mitotic nuclear division]
GO:0007264 [small GTPase mediated signal transduction]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0030496 [midbody]
GO:0031902 [late endosome membrane]
GO:0043014 [alpha-tubulin binding]
GO:0048487 [beta-tubulin binding]
GO:0051233 [spindle midzone]
GO:0051301 [cell division]
GO:0070062 [extracellular exosome]
Show all
186 aa
21.4 kDa
No 0
ARL8A-201
ENSP00000485023
ENST00000614750
A0A087X2J2 [Direct mapping]
ADP-ribosylation factor-like protein 8A
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005525 [GTP binding]
GO:0005622 [intracellular]
GO:0007264 [small GTPase mediated signal transduction]
Show all
147 aa
16.9 kDa
No 0

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