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HSPD1
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    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:142.0TPM
GTEx:66.3RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Low
Neuronal cells:Low
Neuropil:Not detected
 

Antibody staining

Antibody HPA001523

 

Antibody CAB002775

 

Antibody CAB072816

 

Endothelial cells

Not detected   Not detected   Medium  

Glial cells

Medium   Low   Medium  

Neuronal cells

Medium   Low   High  

Neuropil

Low   Not detected   Medium  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

142.0

N/A Male, age 5 Sample 1
TPM: 121.1
overview Female, age 40 Sample 2
TPM: 162.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70 Sample 3
TPM: 142
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

66.3

GTEx sample id

Sample description

RPKM

Brain - Cortex
RPKM: 61.7
Samples: 114

Max RPKM: 329.9
Min RPKM: 29.8
Std RPKM: 35.8
Median RPKM: 51.8
GTEX-11WQK-3026-SM-5EQL6 50-59 years, male 329.9
GTEX-13OVJ-2826-SM-5L3GW 50-59 years, female 225.5
GTEX-13IVO-2926-SM-5L3CZ 70-79 years, male 146.9
GTEX-11GSP-3226-SM-5986O 60-69 years, female 131.0
GTEX-11OC5-0726-SM-5P9JK 60-69 years, male 125.4
GTEX-13JVG-3126-SM-5L3FH 60-69 years, male 124.8
GTEX-13PVQ-3026-SM-5SI93 50-59 years, male 120.0
GTEX-12WSH-3026-SM-5CVNI 50-59 years, male 103.7
GTEX-NPJ8-1526-SM-2D7VU 40-49 years, male 103.7
GTEX-ZAJG-3126-SM-5HL9J 50-59 years, female 99.1
GTEX-13NYS-3126-SM-5KLYV 60-69 years, male 95.3
GTEX-139T8-1026-SM-5J2MC 60-69 years, male 88.4
GTEX-TSE9-3026-SM-3DB76 60-69 years, female 86.0
GTEX-WWYW-3126-SM-3NB39 50-59 years, female 85.3
GTEX-144FL-3026-SM-5O99C 50-59 years, male 77.9
GTEX-WHSE-3026-SM-3P5ZH 20-29 years, male 71.7
GTEX-X585-3026-SM-46MWF 50-59 years, male 70.4
GTEX-PVOW-2526-SM-2XCF7 40-49 years, male 69.1
GTEX-13NYC-2826-SM-5K7WR 60-69 years, male 68.9
GTEX-13FHO-3026-SM-5J1O9 60-69 years, male 68.7
GTEX-1192X-3126-SM-5N9BY 50-59 years, male 67.1
GTEX-13JUV-2926-SM-5LZX7 40-49 years, female 66.1
GTEX-OXRN-2426-SM-2I5EQ 50-59 years, male 65.0
GTEX-14A5I-2926-SM-5Q5CQ 50-59 years, female 63.5
GTEX-XOTO-3026-SM-4B65M 50-59 years, male 61.4
GTEX-NPJ7-2726-SM-2I3FT 60-69 years, female 60.0
GTEX-1445S-3026-SM-5O9BR 60-69 years, male 59.8
GTEX-QDT8-2926-SM-32PKC 30-39 years, female 59.8
GTEX-PWO3-0926-SM-2I5EY 60-69 years, female 59.5
GTEX-13SLX-3126-SM-5S2Q5 50-59 years, female 58.7
GTEX-11O72-2926-SM-5BC4V 40-49 years, male 57.9
GTEX-QVUS-2826-SM-3GADB 60-69 years, female 57.5
GTEX-QMR6-1426-SM-32PLA 50-59 years, male 57.3
GTEX-111FC-3126-SM-5GZZ2 60-69 years, male 57.2
GTEX-RNOR-2326-SM-2TF4I 50-59 years, female 57.0
GTEX-13X6K-2926-SM-5Q5D5 60-69 years, female 56.8
GTEX-R55F-1326-SM-5S2V4 50-59 years, male 55.9
GTEX-WZTO-2926-SM-3NM9I 40-49 years, male 55.2
GTEX-11ONC-2926-SM-5P9JM 60-69 years, male 54.7
GTEX-13FHP-3026-SM-5IJBS 50-59 years, male 54.7
GTEX-X4XX-3026-SM-3NMB2 60-69 years, male 54.5
GTEX-UTHO-3026-SM-3GAFB 60-69 years, male 54.3
GTEX-YFC4-3126-SM-5PNV6 40-49 years, female 54.3
GTEX-12ZZX-2926-SM-5GCOQ 40-49 years, female 53.9
GTEX-ZE7O-3126-SM-5HL5X 50-59 years, female 53.7
GTEX-1117F-3226-SM-5N9CT 60-69 years, female 53.5
GTEX-11TTK-2926-SM-5PNYP 60-69 years, female 53.5
GTEX-147GR-3026-SM-5S2ML 60-69 years, male 53.2
GTEX-12ZZZ-3026-SM-5BC67 60-69 years, male 53.1
GTEX-ZAK1-3026-SM-5S2MJ 50-59 years, female 52.9
GTEX-ZUA1-3026-SM-59HJC 40-49 years, male 52.7
GTEX-13FLW-1426-SM-5K7YE 50-59 years, male 52.4
GTEX-ZYFD-3026-SM-5E44C 50-59 years, male 52.2
GTEX-12ZZY-3026-SM-5GCOU 60-69 years, male 52.1
GTEX-T2IS-3026-SM-32QPM 20-29 years, female 52.1
GTEX-13G51-3026-SM-5IJB8 60-69 years, male 51.9
GTEX-13O3Q-2926-SM-5KM45 50-59 years, male 51.8
GTEX-11GSO-2926-SM-5HL73 60-69 years, male 51.7
GTEX-11DXY-3226-SM-5GIDE 60-69 years, male 51.4
GTEX-XLM4-3026-SM-4AT6L 60-69 years, male 51.3
GTEX-QVJO-1426-SM-2S1QY 60-69 years, female 51.2
GTEX-13NYB-3026-SM-5IJD7 40-49 years, male 50.9
GTEX-13OW6-3026-SM-5J2MI 50-59 years, male 50.9
GTEX-14ASI-3026-SM-5S2PN 60-69 years, male 50.8
GTEX-1128S-2726-SM-5H12C 60-69 years, female 50.5
GTEX-144GL-3026-SM-5Q5CW 50-59 years, male 50.3
GTEX-N7MT-1126-SM-5SI7V 60-69 years, female 50.1
GTEX-145MF-2726-SM-5O995 50-59 years, male 50.0
GTEX-131YS-3126-SM-5KLYT 60-69 years, female 49.9
GTEX-145MH-3026-SM-5Q5DZ 50-59 years, male 49.8
GTEX-13OW8-2826-SM-5L3GC 60-69 years, male 49.7
GTEX-WL46-2926-SM-3LK82 50-59 years, male 49.7
GTEX-RU72-3026-SM-5SI7Y 50-59 years, female 49.4
GTEX-12ZZW-2926-SM-5LZUP 50-59 years, male 49.1
GTEX-ZVT3-3026-SM-5E43N 60-69 years, female 49.1
GTEX-11NUK-2926-SM-5A5MD 50-59 years, male 48.9
GTEX-T5JC-2426-SM-3NMDB 20-29 years, male 48.8
GTEX-12WSC-3026-SM-5GCNF 50-59 years, male 48.6
GTEX-13FXS-3126-SM-5J2NN 50-59 years, male 48.6
GTEX-14BMV-3026-SM-5S2PQ 50-59 years, male 48.5
GTEX-12126-1026-SM-5P9JJ 20-29 years, male 48.4
GTEX-145MG-3026-SM-5RQJA 50-59 years, male 48.4
GTEX-WVLH-3026-SM-3MJG9 50-59 years, male 48.4
GTEX-13OVH-3026-SM-5MR4N 70-79 years, male 48.3
GTEX-1399T-3026-SM-5KLZC 60-69 years, male 47.9
GTEX-11EMC-3226-SM-5EGKW 60-69 years, female 47.6
GTEX-145LS-3126-SM-5Q5BY 60-69 years, female 47.3
GTEX-Q2AG-2926-SM-2HMJ3 40-49 years, female 47.1
GTEX-11PRG-2926-SM-5987A 50-59 years, male 46.7
GTEX-11EI6-3026-SM-5GZZO 60-69 years, male 46.6
GTEX-13X6J-3026-SM-5Q5CU 50-59 years, male 46.1
GTEX-T6MN-2626-SM-32PMQ 50-59 years, male 46.1
GTEX-13VXU-2926-SM-5LU5C 50-59 years, male 46.0
GTEX-13OW7-3026-SM-5L3GY 50-59 years, male 45.9
GTEX-Y8DK-0826-SM-4TT3T 60-69 years, male 45.3
GTEX-11DXW-1126-SM-5H12Q 40-49 years, male 45.2
GTEX-13QIC-2926-SM-5J2NF 60-69 years, female 45.1
GTEX-11GS4-3126-SM-5A5LH 60-69 years, male 45.0
GTEX-132Q8-3026-SM-5PNVG 60-69 years, male 44.9
GTEX-13PL6-3126-SM-5LUAR 40-49 years, female 44.9
GTEX-ZZPT-3026-SM-5GZXH 50-59 years, male 44.9
GTEX-131XW-3126-SM-5LZUC 50-59 years, female 44.8
GTEX-YJ89-3026-SM-5IFJI 60-69 years, male 44.5
GTEX-1313W-3126-SM-5LZUI 50-59 years, female 44.0
GTEX-11ZUS-2926-SM-5FQSL 30-39 years, male 43.5
GTEX-Y111-2726-SM-4TT3N 50-59 years, male 42.8
GTEX-117XS-3026-SM-5N9CA 60-69 years, male 42.3
GTEX-13S7M-3126-SM-5RQJQ 60-69 years, female 42.1
GTEX-11OF3-2926-SM-5HL78 60-69 years, male 41.3
GTEX-13O3O-3126-SM-5KM3H 60-69 years, female 41.3
GTEX-12WSD-3126-SM-5HL7P 60-69 years, female 40.5
GTEX-Z93S-2926-SM-57WB9 50-59 years, male 38.1
GTEX-12WSA-2926-SM-5EQ4D 60-69 years, male 33.1
GTEX-11NV4-2126-SM-5N9DS 60-69 years, male 29.8
Show all
Brain - Frontal Cortex (BA9)
RPKM: 71.1
Samples: 108

Max RPKM: 598.7
Min RPKM: 34.5
Std RPKM: 61.4
Median RPKM: 56.3
GTEX-13N2G-0011-R10a-SM-5MR34 60-69 years, male 598.7
GTEX-11WQK-0011-R10a-SM-5BC6R 50-59 years, male 264.6
GTEX-13OVJ-0011-R10b-SM-5L3HT 50-59 years, female 212.8
GTEX-OXRO-0011-R10A-SM-2I5EH 60-69 years, female 208.5
GTEX-13N1W-0011-R10b-SM-5MR4H 70-79 years, male 166.4
GTEX-13JVG-0011-R10b-SM-5KM2P 60-69 years, male 139.9
GTEX-11GSP-0011-R10a-SM-5NQ7J 60-69 years, female 120.6
GTEX-WWYW-0011-R10A-SM-3NB35 50-59 years, female 116.8
GTEX-13IVO-0011-R10a-SM-5LZY3 70-79 years, male 114.0
GTEX-TSE9-0011-R10A-SM-3DB7O 60-69 years, female 110.0
GTEX-12WSH-0011-R10a-SM-5LZUS 50-59 years, male 93.7
GTEX-13NYS-0011-R10a-SM-5MR4S 60-69 years, male 89.6
GTEX-NPJ8-0011-R10A-SM-2YUMO 40-49 years, male 87.3
GTEX-13QJC-0011-R10a-SM-5SI63 60-69 years, female 85.6
GTEX-X261-0011-R10B-SM-4E3JT 50-59 years, male 85.5
GTEX-NL3H-0011-R10A-SM-2I3E9 60-69 years, male 83.5
GTEX-QVUS-0011-R10A-SM-3GIK3 60-69 years, female 82.2
GTEX-13FLV-0011-R10b-SM-5LZZ2 50-59 years, male 80.3
GTEX-ZV68-0011-R10a-SM-51MT7 50-59 years, female 75.3
GTEX-13JUV-0011-R10b-SM-5LZXR 40-49 years, female 74.4
GTEX-12ZZY-0011-R10b-SM-5HL7W 60-69 years, male 73.9
GTEX-1445S-0011-R10a-SM-5PNWB 60-69 years, male 73.3
GTEX-XMD1-0011-R10A-SM-4AT4A 60-69 years, male 69.5
GTEX-147GR-0011-R10b-SM-5S2UM 60-69 years, male 68.1
GTEX-ZF28-0011-R10a-SM-4WWEH 60-69 years, male 67.2
GTEX-13FHO-0011-R10b-SM-5J2MM 60-69 years, male 66.3
GTEX-NL4W-0011-R10A-SM-2I3DY 50-59 years, male 66.2
GTEX-NPJ7-0011-R10A-SM-2I3E5 60-69 years, female 65.4
GTEX-12WSD-0011-R10b-SM-5GU79 60-69 years, female 64.5
GTEX-OXRN-0011-R10A-SM-2I5GC 50-59 years, male 64.5
GTEX-QDT8-0011-R10A-SM-32PKG 30-39 years, female 63.6
GTEX-YFC4-0011-R10a-SM-4SOK5 40-49 years, female 62.5
GTEX-14ASI-0011-R10b-SM-5S2VZ 60-69 years, male 61.8
GTEX-X4EP-0011-R10B-SM-4QASJ 60-69 years, female 61.5
GTEX-13SLX-0011-R10a-SM-5P9HV 50-59 years, female 61.4
GTEX-X4XX-0011-R10B-SM-46MWO 60-69 years, male 61.0
GTEX-139TS-0011-R10a-SM-5K7TU 60-69 years, male 60.8
GTEX-WVLH-0011-R10A-SM-3MJFM 50-59 years, male 60.6
GTEX-12WSC-0011-R10a-SM-5GU57 50-59 years, male 59.9
GTEX-12ZZW-0011-R10b-SM-5HL9X 50-59 years, male 59.8
GTEX-P44H-0011-R10A-SM-2XCEK 40-49 years, male 59.5
GTEX-12126-0011-R10b-SM-5BC6T 20-29 years, male 59.1
GTEX-14BIL-0011-R10a-SM-5SI75 50-59 years, male 59.1
GTEX-T5JC-0011-R10A-SM-32PM2 20-29 years, male 59.1
GTEX-145MG-0011-R10a-SM-5PNWG 50-59 years, male 58.6
GTEX-T6MN-0011-R10A-SM-32QP7 50-59 years, male 58.2
GTEX-S7SE-0011-R10A-SM-2XCDF 50-59 years, male 58.1
GTEX-13RTJ-0011-R10b-SM-5O9CW 60-69 years, male 58.0
GTEX-X585-0011-R10A-SM-46MUY 50-59 years, male 57.5
GTEX-13SLW-0011-R10a-SM-5S2UI 70-79 years, male 56.9
GTEX-12ZZX-0011-R10b-SM-5DUWK 40-49 years, female 56.8
GTEX-145MH-0011-R10b-SM-5PNUK 50-59 years, male 56.8
GTEX-11H98-0011-R10b-SM-5NQ98 50-59 years, male 56.6
GTEX-13FXS-0011-R10a-SM-5J2MA 50-59 years, male 56.4
GTEX-13OW7-0011-R10a-SM-5L3H3 50-59 years, male 56.2
GTEX-ZE7O-0011-R10a-SM-57WAZ 50-59 years, female 56.1
GTEX-13O3Q-0011-R10b-SM-5KM39 50-59 years, male 55.8
GTEX-13X6K-0011-R10a-SM-5P9JR 60-69 years, female 55.7
GTEX-1313W-0011-R10b-SM-5DUXA 50-59 years, female 55.3
GTEX-13O3O-0011-R10a-SM-5LUA9 60-69 years, female 55.3
GTEX-YJ89-0011-R10a-SM-4SOK9 60-69 years, male 55.3
GTEX-XLM4-0011-R10A-SM-4AT5P 60-69 years, male 54.7
GTEX-ZAB4-0011-R10a-SM-4SOKH 40-49 years, male 54.5
GTEX-ZDXO-0011-R10a-SM-4WWD8 60-69 years, male 54.5
GTEX-QVJO-0011-R10A-SM-2S1QJ 60-69 years, female 54.4
GTEX-WL46-0011-R10A-SM-3MJFQ 50-59 years, male 54.4
GTEX-13OW8-0011-R10a-SM-5L3H6 60-69 years, male 54.2
GTEX-11WQC-0011-R10a-SM-57WCT 60-69 years, male 53.6
GTEX-12WSM-0011-R10a-SM-5DUWV 60-69 years, male 53.4
GTEX-WZTO-0011-R10B-SM-4E3KB 40-49 years, male 53.2
GTEX-14BIN-0011-R10a-SM-5S2UA 50-59 years, female 53.1
GTEX-12WSF-0011-R10a-SM-5LZVH 70-79 years, male 53.0
GTEX-QMR6-0011-R10A-SM-32PKO 50-59 years, male 52.9
GTEX-Y8DK-0011-R10A-SM-4SOK1 60-69 years, male 52.9
GTEX-131YS-0011-R10b-SM-5EQ5N 60-69 years, female 52.6
GTEX-ZVZQ-0011-R10b-SM-51MRT 60-69 years, female 52.3
GTEX-N7MT-0011-R10A-SM-2I3E1 60-69 years, female 52.2
GTEX-Q2AG-0011-R10A-SM-2HMLA 40-49 years, female 52.0
GTEX-13S7M-0011-R10b-SM-5PNZB 60-69 years, female 51.8
GTEX-13FLW-0011-R10b-SM-5LZZF 50-59 years, male 51.5
GTEX-132Q8-0011-R10b-SM-5DUWZ 60-69 years, male 51.3
GTEX-13X6I-0011-R10a-SM-5PNWI 60-69 years, male 51.2
GTEX-ZUA1-0011-R10a-SM-51MT6 40-49 years, male 50.9
GTEX-13OVL-0011-R10a-SM-5L3GS 50-59 years, male 50.2
GTEX-13NYB-0011-R10a-SM-5KM43 40-49 years, male 49.3
GTEX-12WSE-0011-R10b-SM-5P9JV 20-29 years, male 49.0
GTEX-131XH-0011-R10a-SM-5EGLJ 50-59 years, male 48.9
GTEX-13QIC-0011-R10a-SM-5O9C7 60-69 years, female 48.6
GTEX-N7MS-0011-R10A-SM-2HMJK 60-69 years, male 48.6
GTEX-13OW6-0011-R10a-SM-5L3HE 50-59 years, male 48.4
GTEX-13CZV-0011-R10b-SM-5LZYD 60-69 years, male 48.0
GTEX-145LU-0011-R10a-SM-5PNWJ 50-59 years, male 47.8
GTEX-13X6J-0011-R10b-SM-5PNWA 50-59 years, male 47.5
GTEX-Z93S-0011-R10a-SM-4RGNM 50-59 years, male 47.5
GTEX-12ZZZ-0011-R10a-SM-5P9HC 60-69 years, male 47.1
GTEX-145LS-0011-R10a-SM-5PNUQ 60-69 years, female 45.8
GTEX-147F4-0011-R10b-SM-5S2WC 50-59 years, male 45.5
GTEX-ZVT3-0011-R10b-SM-57WB6 60-69 years, female 45.1
GTEX-11ZUS-0011-R10b-SM-5BC79 30-39 years, male 44.9
GTEX-131XW-0011-R10a-SM-5DUVA 50-59 years, female 44.5
GTEX-14753-0011-R10b-SM-5S2WE 60-69 years, male 44.1
GTEX-13FTZ-0011-R10b-SM-5KLZS 60-69 years, male 43.1
GTEX-1477Z-0011-R10b-SM-5S2RF 60-69 years, male 42.8
GTEX-12WSA-0011-R10b-SM-5P9ET 60-69 years, male 41.8
GTEX-RVPU-0011-R10A-SM-2XCAH 50-59 years, male 41.6
GTEX-13G51-0011-R10b-SM-5LZYF 60-69 years, male 40.8
GTEX-ZXG5-0011-R10a-SM-57WDD 60-69 years, male 40.7
GTEX-13NZA-0011-R10b-SM-5KM54 60-69 years, male 34.5
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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