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HSPD1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:165.1TPM
GTEx:74.9RPKM
FANTOM5:146.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA001523

  

Antibody CAB002775

  

Antibody CAB072816

  

Endothelial cells

 Low   Not detected   Medium  

Glandular cells

 High   Medium   High  

Peripheral nerve/ganglion

 High   Not detected   Medium  
     
     
     

COLON - HPA RNA-seq

Average TPM

165.1
overview Male, age 54 Sample 1
TPM: 118.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 123.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 142.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 168.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 112.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 211.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 274.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 163
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 127.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 242.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 178.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 177.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 105
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

74.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 61.9
Samples: 149

Max RPKM: 351.9
Min RPKM: 30.5
Std RPKM: 33.4
Median RPKM: 53.3
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 351.9
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 183.4
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 167.0
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 146.9
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 122.3
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 118.2
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 115.5
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 114.6
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 106.2
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 103.0
Show all
Colon - Transverse
RPKM: 84.8
Samples: 196

Max RPKM: 515.6
Min RPKM: 36.4
Std RPKM: 49.3
Median RPKM: 72.3
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 515.6
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 289.8
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 211.0
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 207.0
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 204.8
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 203.3
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 197.1
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 195.8
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 194.5
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 177.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

146.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 146.1
FF:10014-101C5 62,83,84 years, mixed 146.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.