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COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:9.7TPM
GTEx:6.0RPKM
FANTOM5:13.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA035881

  

Glandular cells

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

9.7
overview Male, age 54 Sample 1
TPM: 8.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 8.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 10.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 11.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 11.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 13.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 10.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 7.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 12.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 7.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 8.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 7.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

6.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 6.3
Samples: 149

Max RPKM: 13.8
Min RPKM: 3.1
Std RPKM: 1.6
Median RPKM: 6.1
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 13.8
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 13.5
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 11.8
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 10.1
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 10.0
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 9.9
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 9.7
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 9.6
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 9.0
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 8.6
Show all
Colon - Transverse
RPKM: 5.8
Samples: 196

Max RPKM: 16.3
Min RPKM: 1.7
Std RPKM: 2.0
Median RPKM: 5.5
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 16.3
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 13.7
GTEX-QMRM-1226-SM-447C6 50-59 years, male 13.0
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 11.7
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 10.6
GTEX-144GM-1226-SM-5LU52 20-29 years, male 10.5
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 10.4
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 10.3
GTEX-144GN-1126-SM-5LU33 50-59 years, male 9.9
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 9.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

13.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 13.5
FF:10014-101C5 62,83,84 years, mixed 13.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.