Expression of CNPY1 in cancer - Summary - The Human Protein Atlas

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CNPY1

TISSUE

CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	CNPY1
Gene description	Canopy FGF signaling regulator 1
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	2
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Tissue enriched (glioma)
HPA (cell line):	Cell line enriched (AF22)
HPA (normal tissue):	Group enriched (pancreas, testis)

Protein evidence

Evidence at transcript level

Protein expression
normal tissue

Estimation of protein expression could not be performed. View primary data.

ANTIBODY IHC RELIABILITY
Data reliability description	RNA-based expert annotation gave inconclusive results. Pending external verification.
Reliability score	Uncertain based on 1 antibody. HPA047400
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PROGNOSTIC SUMMARY
Gene product is not prognostic.
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RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Tissue enriched (glioma)

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA047400

GENE INFORMATION
Gene name	CNPY1
Synonyms
Description	Canopy FGF signaling regulator 1 (HGNC Symbol)
Entrez gene summary	Cnpy1 is expressed in the midbrain-hindbrain (MHB) boundary in zebrafish, binds FGFR1 (MIM 136350), and plays a role in FGF signaling (Hirate and Okamoto, 2006 [PubMed 16488878]).[supplied by OMIM, Dec 2008]
Chromosome	7
Cytoband	q36.3
Chromosome location (bp)	155474206 - 155533862
Protein evidence	Evidence at transcript level (all genes)
Ensembl	ENSG00000146910 (version 83.38)
Entrez gene	285888
UniProt	Q3B7I2 (UniProt - Inferred from homology)
neXtProt	NX_Q3B7I2
Antibodypedia	CNPY1 antibodies

PROTEIN BROWSER

CNPY1-001	CNPY1-002

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
CNPY1-001 ENSP00000317439 ENST00000321736	Q3B7I2 [Direct mapping] Protein canopy homolog 1 Show all	Predicted intracellular proteins Show all		92 aa 11 kDa	No	0
CNPY1-002 ENSP00000384514 ENST00000406197	Q3B7I2 [Direct mapping] Protein canopy homolog 1 Show all	Predicted intracellular proteins Show all		92 aa 11 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.