Tissue expression of CCDC120 - Summary - The Human Protein Atlas

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CCDC120

TISSUE

CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	CCDC120
Gene description	Coiled-coil domain containing 120
Protein class	Cancer-related genes Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	5
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Mixed
GTEx:	Mixed
FANTOM5:	Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Cytoplasmic expression in most tissues.

DATA RELIABILITY
Data reliability description	Antibody staining mainly consistent with RNA expression data. Pending external verification.
Reliability score	Approved based on 1 antibody. HPA000561
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

Cerebral cortex

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

Thyroid gland

Parathyroid gland

Adrenal gland

Bone marrow & immune system

Appendix

Bone marrow

Lymph node

Tonsil

Spleen

Muscle tissues

Heart muscle

Skeletal muscle

Smooth muscle

Lung

Nasopharynx

N/A

Bronchus

N/A

Lung

Liver & gallbladder

Liver

Gallbladder

Pancreas

Pancreas

Gastrointestinal tract

Oral mucosa

N/A

Salivary gland

Esophagus

Stomach

Duodenum

Small intestine

Colon

Rectum

Kidney & urinary bladder

Kidney

Urinary bladder

Male tissues

Testis

Epididymis

Prostate

Seminal vesicle

Female tissues

Breast

Vagina

N/A

Cervix, uterine

Endometrium

Fallopian tube

Ovary

Placenta

Adipose & soft tissue

Adipose tissue

Soft tissue

N/A

Skin

Skin

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
Organ Expression Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Mixed
GTEx dataset Organ Expression Alphabetical RNA tissue category: Mixed
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	CCDC120 (HGNC Symbol)
Synonyms	JM11
Description	Coiled-coil domain containing 120 (HGNC Symbol)
Entrez gene summary	This gene encodes a protein that contains a coiled-coil domain. Several alternatively spliced transcript variants encoding multiple isoforms have been found for this gene. [provided by RefSeq, Nov 2012]
Chromosome	X
Cytoband	p11.23
Chromosome location (bp)	49053572 - 49069857
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000147144 (version 83.38)
Entrez gene	90060
UniProt	Q96HB5 (UniProt - Evidence at protein level)
neXtProt	NX_Q96HB5
Antibodypedia	CCDC120 antibodies

PROTEIN BROWSER

CCDC120-001	CCDC120-004	CCDC120-005	CCDC120-006	CCDC120-007

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
CCDC120-001 ENSP00000475676 ENST00000606812	Q96HB5 [Direct mapping] Coiled-coil domain-containing protein 120 Show all	Predicted intracellular proteins Cancer-related genes Mutated cancer genes Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005768 [endosome] GO:0007275 [multicellular organismal development] GO:0030426 [growth cone] Show all	630 aa 67.6 kDa	No	0
CCDC120-004 ENSP00000470294 ENST00000597275	Q96HB5 [Direct mapping] Coiled-coil domain-containing protein 120 Show all	Predicted intracellular proteins Cancer-related genes Mutated cancer genes Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005768 [endosome] GO:0007275 [multicellular organismal development] GO:0030426 [growth cone] Show all	630 aa 67.6 kDa	No	0
CCDC120-005 ENSP00000474761 ENST00000496529	Q96HB5 [Direct mapping] Coiled-coil domain-containing protein 120 Show all	Predicted intracellular proteins Cancer-related genes Mutated cancer genes Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005768 [endosome] GO:0007275 [multicellular organismal development] GO:0030426 [growth cone] Show all	630 aa 67.6 kDa	No	0
CCDC120-006 ENSP00000474071 ENST00000603986	Q96HB5 [Direct mapping] Coiled-coil domain-containing protein 120 Show all	Predicted intracellular proteins Cancer-related genes Mutated cancer genes Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005768 [endosome] GO:0007275 [multicellular organismal development] GO:0030426 [growth cone] Show all	696 aa 75 kDa	No	0
CCDC120-007 ENSP00000443351 ENST00000536628	Q96HB5 [Direct mapping] Coiled-coil domain-containing protein 120 Show all	Predicted intracellular proteins Cancer-related genes Mutated cancer genes Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005768 [endosome] GO:0007275 [multicellular organismal development] GO:0030426 [growth cone] Show all	618 aa 66.4 kDa	No	0

Contact

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.