Tissue expression of MCPH1 - Staining in small intestine

SMALL INTESTINE - Expression summary

Protein expression

RNA expression

HPA:	6.5	TPM
GTEx:	2.8	RPKM
FANTOM5:	46.9	Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:

Medium

Antibody staining	Antibody HPA008238	Antibody CAB012177
Glandular cells	Medium	Medium

SMALL INTESTINE - HPA RNA-seq

Average TPM	6.5

Male, age 65

Sample 1
TPM: 6

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 39

Sample 2
TPM: 6.6

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 68

Sample 3
TPM: 7.3

Cell types%

Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55

Male, age 85

Sample 4
TPM: 6.2

SMALL INTESTINE - GTEx RNA-seq

Average RPKM	2.8

GTEx sample id

Sample description

RPKM

Small Intestine - Terminal Ileum
RPKM: 2.8

Samples: 88

Max RPKM: 4.6
Min RPKM: 1.3
Std RPKM: 0.7
Median RPKM: 2.8

GTEX-UPK5-2026-SM-4JBIM

40-49 years, male

4.6

GTEX-11VI4-1626-SM-5EQKO

40-49 years, female

4.4

GTEX-13O61-1326-SM-5KM31

60-69 years, male

4.4

GTEX-VUSG-1726-SM-4KKZL

50-59 years, male

4.2

GTEX-X15G-1426-SM-4PQZK

50-59 years, female

4.2

GTEX-148VJ-2226-SM-5NQ9M

70-79 years, male

4.0

GTEX-11NSD-1726-SM-5N9C3

20-29 years, male

3.9

GTEX-1399U-2126-SM-5IFEZ

50-59 years, female

3.8

GTEX-WRHK-1026-SM-4MVOD

20-29 years, female

3.8

GTEX-ZC5H-2326-SM-4WAYT

40-49 years, female

3.8

Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million	46.9

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 46.9

FF:10024-101D6

15,40,85 years, mixed

46.9