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CSGALNACT1

GENERAL INFORMATION

Gene name

 CSGALNACT1

Gene description

 Chondroitin sulfate N-acetylgalactosaminyltransferase 1

Protein class

 Enzymes
Predicted intracellular proteins
Predicted secreted proteins

Predicted localization

 Intracellular,Secreted

Number of transcripts

 7
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category
TCGA (cancer tissue):Expressed in all
HPA (cell line):Cell line enhanced (A549, BJ hTERT+, RPTEC TERT1, U-2197, U-87 MG)
HPA (normal tissue):Expressed in all

Protein evidence

 Evidence at protein level

ANTIBODY IHC RELIABILITY

Reliability score

 Pending cancer tissue analysis.

PROGNOSTIC SUMMARY
Gene product is not prognostic.
Show all

RNA EXPRESSION OVERVIEW
TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Pending cancer tissue analysis

STAINING SUMMARY

 

GENE INFORMATION

Gene name

 CSGALNACT1 (HGNC Symbol)

Synonyms

 ChGn, CSGalNAcT-1, FLJ11264

Description

 Chondroitin sulfate N-acetylgalactosaminyltransferase 1 (HGNC Symbol)

Entrez gene summary

Chromosome

 8

Cytoband

 p21.3

Chromosome location (bp)

 19404161 - 19758029

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000147408 (version 83.38)

Entrez gene

 55790

UniProt

 Q8TDX6 (UniProt - Evidence at protein level)

neXtProt

 NX_Q8TDX6

Antibodypedia

 CSGALNACT1 antibodies

PROTEIN BROWSER
CSGALNACT1-001
CSGALNACT1-004
CSGALNACT1-005
CSGALNACT1-006
CSGALNACT1-007
CSGALNACT1-009
CSGALNACT1-012

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
CSGALNACT1-001
ENSP00000330805
ENST00000332246
Q8TDX6 [Direct mapping]
Chondroitin sulfate N-acetylgalactosaminyltransferase 1
Show all
Enzymes
   ENZYME proteins
   Transferases
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000139 [Golgi membrane]
GO:0005622 [intracellular]
GO:0005975 [carbohydrate metabolic process]
GO:0007399 [nervous system development]
GO:0008037 [cell recognition]
GO:0008283 [cell proliferation]
GO:0008376 [acetylgalactosaminyltransferase activity]
GO:0008955 [peptidoglycan glycosyltransferase activity]
GO:0009653 [anatomical structure morphogenesis]
GO:0015014 [heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process]
GO:0015020 [glucuronosyltransferase activity]
GO:0019276 [UDP-N-acetylgalactosamine metabolic process]
GO:0030166 [proteoglycan biosynthetic process]
GO:0030173 [integral component of Golgi membrane]
GO:0030198 [extracellular matrix organization]
GO:0030203 [glycosaminoglycan metabolic process]
GO:0030204 [chondroitin sulfate metabolic process]
GO:0030206 [chondroitin sulfate biosynthetic process]
GO:0030210 [heparin biosynthetic process]
GO:0032580 [Golgi cisterna membrane]
GO:0044281 [small molecule metabolic process]
GO:0046398 [UDP-glucuronate metabolic process]
GO:0046872 [metal ion binding]
GO:0047237 [glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity]
GO:0047238 [glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity]
GO:0050650 [chondroitin sulfate proteoglycan biosynthetic process]
GO:0050651 [dermatan sulfate proteoglycan biosynthetic process]
GO:0050653 [chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process]
Show all
 532 aa
61.3 kDa 		Yes 0
CSGALNACT1-004
ENSP00000411816
ENST00000454498
Q8TDX6 [Direct mapping]
Chondroitin sulfate N-acetylgalactosaminyltransferase 1
Show all
Enzymes
   ENZYME proteins
   Transferases
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000139 [Golgi membrane]
GO:0001958 [endochondral ossification]
GO:0005622 [intracellular]
GO:0005975 [carbohydrate metabolic process]
GO:0007399 [nervous system development]
GO:0008037 [cell recognition]
GO:0008283 [cell proliferation]
GO:0008376 [acetylgalactosaminyltransferase activity]
GO:0008955 [peptidoglycan glycosyltransferase activity]
GO:0009653 [anatomical structure morphogenesis]
GO:0015014 [heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process]
GO:0015020 [glucuronosyltransferase activity]
GO:0019276 [UDP-N-acetylgalactosamine metabolic process]
GO:0030166 [proteoglycan biosynthetic process]
GO:0030173 [integral component of Golgi membrane]
GO:0030198 [extracellular matrix organization]
GO:0030203 [glycosaminoglycan metabolic process]
GO:0030204 [chondroitin sulfate metabolic process]
GO:0030206 [chondroitin sulfate biosynthetic process]
GO:0030210 [heparin biosynthetic process]
GO:0032580 [Golgi cisterna membrane]
GO:0044281 [small molecule metabolic process]
GO:0046398 [UDP-glucuronate metabolic process]
GO:0046872 [metal ion binding]
GO:0047237 [glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity]
GO:0047238 [glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity]
GO:0050650 [chondroitin sulfate proteoglycan biosynthetic process]
GO:0050651 [dermatan sulfate proteoglycan biosynthetic process]
GO:0050653 [chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process]
GO:0051216 [cartilage development]
Show all
 532 aa
61.3 kDa 		Yes 0
CSGALNACT1-005
ENSP00000429809
ENST00000522854
Q8TDX6 [Direct mapping]
Chondroitin sulfate N-acetylgalactosaminyltransferase 1
Show all
Enzymes
   ENZYME proteins
   Transferases
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000139 [Golgi membrane]
GO:0005622 [intracellular]
GO:0005975 [carbohydrate metabolic process]
GO:0007399 [nervous system development]
GO:0008037 [cell recognition]
GO:0008283 [cell proliferation]
GO:0008376 [acetylgalactosaminyltransferase activity]
GO:0008955 [peptidoglycan glycosyltransferase activity]
GO:0009653 [anatomical structure morphogenesis]
GO:0015014 [heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process]
GO:0015020 [glucuronosyltransferase activity]
GO:0019276 [UDP-N-acetylgalactosamine metabolic process]
GO:0030166 [proteoglycan biosynthetic process]
GO:0030173 [integral component of Golgi membrane]
GO:0030198 [extracellular matrix organization]
GO:0030203 [glycosaminoglycan metabolic process]
GO:0030204 [chondroitin sulfate metabolic process]
GO:0030206 [chondroitin sulfate biosynthetic process]
GO:0030210 [heparin biosynthetic process]
GO:0032580 [Golgi cisterna membrane]
GO:0044281 [small molecule metabolic process]
GO:0046398 [UDP-glucuronate metabolic process]
GO:0046872 [metal ion binding]
GO:0047237 [glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity]
GO:0047238 [glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity]
GO:0050650 [chondroitin sulfate proteoglycan biosynthetic process]
GO:0050651 [dermatan sulfate proteoglycan biosynthetic process]
GO:0050653 [chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process]
Show all
 532 aa
61.3 kDa 		Yes 0
CSGALNACT1-006
ENSP00000429130
ENST00000517494
E5RJB6 [Direct mapping]
Chondroitin sulfate N-acetylgalactosaminyltransferase 1
Show all
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
 96 aa
11 kDa 		Yes 0
CSGALNACT1-007
ENSP00000428089
ENST00000523262
E5RK93 [Direct mapping]
Chondroitin sulfate N-acetylgalactosaminyltransferase 1
Show all
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
 104 aa
11.9 kDa 		Yes 0
CSGALNACT1-009
ENSP00000427740
ENST00000524213
E5RGK2 [Direct mapping]
Chondroitin sulfate N-acetylgalactosaminyltransferase 1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
 14 aa
1.7 kDa 		No 0
CSGALNACT1-012
ENSP00000428774
ENST00000520003
E5RGB2 [Direct mapping]
Chondroitin sulfate N-acetylgalactosaminyltransferase 1
Show all
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
 53 aa
5.8 kDa 		Yes 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.