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B3GAT3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:10.5TPM
GTEx:15.2RPKM
FANTOM5:18.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA051328

  

Endothelial cells

 Not detected  

Glandular cells

 Low  

Peripheral nerve/ganglion

 High  
 
 

COLON - HPA RNA-seq

Average TPM

10.5
overview Male, age 54 Sample 1
TPM: 15.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 10.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 12.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 9.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 9.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 4.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 8.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 9.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 12.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 7.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 16.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 12.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

15.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 15.8
Samples: 149

Max RPKM: 41.4
Min RPKM: 7.5
Std RPKM: 5.8
Median RPKM: 14.8
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 41.4
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 34.3
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 32.1
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 29.3
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 29.1
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 28.2
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 27.0
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 26.8
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 26.8
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 25.6
Show all
Colon - Transverse
RPKM: 14.7
Samples: 196

Max RPKM: 47.3
Min RPKM: 7.4
Std RPKM: 4.0
Median RPKM: 14.2
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 47.3
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 28.9
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 26.2
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 25.9
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 25.4
GTEX-XYKS-2226-SM-4E3IU 60-69 years, female 23.8
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 22.5
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 22.4
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 21.9
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 21.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

18.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 18.5
FF:10014-101C5 62,83,84 years, mixed 18.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.