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MMP3

COLON - Expression summary

RNA expression
HPA:2.0TPM
GTEx:3.6RPKM
FANTOM5:0.2Tags Per Million

COLON - Annotated protein expression
 

Antibody staining

Antibody HPA007875

  

Endothelial cells

 Not detected  

Glandular cells

 High  
 
 

COLON - HPA RNA-seq

Average TPM

2.0
overview Male, age 54 Sample 1
TPM: 0.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 0.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 6.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 2.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 1.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 2.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 2.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 0.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 5.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

3.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 2.6
Samples: 149

Max RPKM: 57.3
Min RPKM: 0.0
Std RPKM: 6.6
Median RPKM: 0.5
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 57.3
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 39.3
GTEX-WFG7-1626-SM-4LVMF 20-29 years, male 30.0
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 25.4
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 15.0
GTEX-WFG8-1726-SM-4LVM6 20-29 years, male 12.3
GTEX-111CU-1226-SM-5EGIN 50-59 years, male 8.8
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 8.7
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 8.4
GTEX-ZV6S-1126-SM-57WE9 40-49 years, female 8.2
Show all
Colon - Transverse
RPKM: 4.4
Samples: 196

Max RPKM: 94.5
Min RPKM: 0.0
Std RPKM: 12.2
Median RPKM: 0.4
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 94.5
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 81.0
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 59.1
GTEX-11ZVC-2126-SM-5EGJ1 50-59 years, female 45.0
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 42.5
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 38.4
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 34.3
GTEX-ZY6K-1226-SM-5GZYL 50-59 years, male 33.4
GTEX-XGQ4-1226-SM-4AT67 50-59 years, male 31.2
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 30.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

0.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 0.2
FF:10014-101C5 62,83,84 years, mixed 0.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.