Expression of FAM160B1 in cancer - Summary - The Human Protein Atlas

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FAM160B1

TISSUE

CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	FAM160B1
Gene description	Family with sequence similarity 160, member B1
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	4
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Expressed in all
HPA (cell line):	Expressed in all
HPA (normal tissue):	Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Nuclear and cytoplasmic expression in most cells.

ANTIBODY IHC RELIABILITY
Data reliability description	Antibody staining mainly not consistent with RNA expression data. Pending external verification.
Reliability score	Uncertain based on 1 antibody. HPA043624
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PROGNOSTIC SUMMARY
Prognostic marker in renal cancer (unfavourable).
Renal cancer p<0.001 Show all

RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA043624

GENE INFORMATION
Gene name	FAM160B1 (HGNC Symbol)
Synonyms	bA106M7.3, KIAA1600
Description	Family with sequence similarity 160, member B1 (HGNC Symbol)
Entrez gene summary
Chromosome	10
Cytoband	q25.3
Chromosome location (bp)	114821744 - 114899832
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000151553 (version 83.38)
Entrez gene	57700
UniProt	Q5W0V3 (UniProt - Evidence at protein level)
neXtProt	NX_Q5W0V3
Antibodypedia	FAM160B1 antibodies

PROTEIN BROWSER

FAM160B1-001	FAM160B1-002	FAM160B1-003	FAM160B1-004

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
FAM160B1-001 ENSP00000358251 ENST00000369248	Q5W0V3 [Direct mapping] Protein FAM160B1 Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all		765 aa 86.6 kDa	No	0
FAM160B1-002 ENSP00000358253 ENST00000369250	Q5W0V3 [Direct mapping] Protein FAM160B1 Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all		738 aa 83.7 kDa	No	0
FAM160B1-003 ENSP00000358249 ENST00000369246	Q5W0V4 [Direct mapping] Protein FAM160B1 Show all	SPOCTOPUS predicted secreted proteins Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		101 aa 11.6 kDa	No	0
FAM160B1-004 ENSP00000411924 ENST00000411414	Q5W0V1 [Direct mapping] Protein FAM160B1 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		83 aa 9.4 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.