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AMN1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:4.3TPM
GTEx:1.4RPKM
FANTOM5:7.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA046157

  

Endothelial cells

 Low  

Glandular cells

 Low  

Peripheral nerve/ganglion

 Not detected  
 
 
 

COLON - HPA RNA-seq

Average TPM

4.3
overview Male, age 54 Sample 1
TPM: 4.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 4.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 1.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 4.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 4.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 5.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 5.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 2.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 5.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 5.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 3.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 4.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

1.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 1.6
Samples: 149

Max RPKM: 3.2
Min RPKM: 0.9
Std RPKM: 0.3
Median RPKM: 1.6
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 3.2
GTEX-145LS-2926-SM-5O99G 60-69 years, female 2.6
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 2.5
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 2.5
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 2.4
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 2.3
GTEX-14BMU-1326-SM-5RQIH 20-29 years, female 2.2
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 2.2
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 2.1
GTEX-1211K-1826-SM-5EGJ2 60-69 years, female 2.1
Show all
Colon - Transverse
RPKM: 1.2
Samples: 196

Max RPKM: 5.7
Min RPKM: 0.5
Std RPKM: 0.5
Median RPKM: 1.1
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 5.7
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 2.7
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 2.5
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 2.5
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 2.3
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 2.3
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 2.2
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 2.2
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 2.2
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 2.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

7.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 7.4
FF:10014-101C5 62,83,84 years, mixed 7.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.