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FAM168B

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:38.7TPM
GTEx:34.0RPKM
FANTOM5:76.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA043778

  

Antibody HPA061659

  

Endothelial cells

 Low   Not detected  

Glandular cells

 Low   Not detected  

Peripheral nerve/ganglion

 Low   Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

38.7
overview Male, age 54 Sample 1
TPM: 57
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 46
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 40.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 44.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 24
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 33
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 34.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 39.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 36.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 35.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 40.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 46.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 26.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

34.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 38.4
Samples: 149

Max RPKM: 73.0
Min RPKM: 17.1
Std RPKM: 8.0
Median RPKM: 38.2
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 73.0
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 58.6
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 52.8
GTEX-13111-1926-SM-5GCOL 50-59 years, male 52.3
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 51.2
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 50.0
GTEX-WYVS-1126-SM-4SOJX 40-49 years, female 49.8
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 49.4
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 49.0
GTEX-ZPIC-2626-SM-57WE2 40-49 years, female 49.0
Show all
Colon - Transverse
RPKM: 30.7
Samples: 196

Max RPKM: 53.9
Min RPKM: 16.6
Std RPKM: 8.0
Median RPKM: 29.1
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 53.9
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 53.7
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 53.0
GTEX-Y114-1526-SM-4TT79 50-59 years, female 52.3
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 50.9
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 50.0
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 49.0
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 47.4
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 46.8
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 46.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

76.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 76.3
FF:10014-101C5 62,83,84 years, mixed 76.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.